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Gene : AT5G44575 A. thaliana

DB identifier  ? AT5G44575 Secondary Identifier  ? locus:1005716116
Brief Description  hypothetical protein
TAIR Computational Description  hypothetical protein;(source:Araport11)
TAIR Curator Summary  SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description  NULL
TAIR Aliases  PROSCOOP8

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1346  
Location: Chr5:17973775-17975120

Gene models - AT5G44575 AT5G44575

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SCOP8_ARATH function Brassicaceae-specific phytocytokine (plant endogenous peptide released into the apoplast) perceived by MIK2 in a BAK1/SERK3 and SERK4 coreceptors-dependent manner, that modulates various physiological and antimicrobial processes including growth prevention and reactive oxygen species (ROS) response regulation (PubMed:34535661). Inhibits root growth (PubMed:34535661).
SCOP8_ARATH similarity Belongs to the serine rich endogenous peptide (SCOOP) phytocytokine family.
SCOP8_ARATH subcellular location The precursor of SCOOP8, PROSCOOP8, accumulates at the plasma membrane and is proteolytically cleaved to release the SCOOP8 in the apoplasm.
SCOP8_ARATH tissue specificity Mostly expressed in roots, and, barely, in seedlings shoots.

1 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
apoplast  ? ECO  
molecular function
receptor serine/threonine kinase binding  ? ECO  
LRR domain binding  ? ECO  
biological process
response to wounding  ? ECO  
response to herbivore  ? ECO  
response to insect  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets