External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G09300:CDS:12 | 168 | Chr5: 2884282-2884449 | Arabidopsis thaliana |
AT5G09300:CDS:11 | 186 | Chr5: 2884544-2884729 | Arabidopsis thaliana |
AT5G09300:CDS:9 | 140 | Chr5: 2884815-2884954 | Arabidopsis thaliana |
AT5G09300:CDS:7 | 112 | Chr5: 2885055-2885166 | Arabidopsis thaliana |
AT5G09300:CDS:6 | 100 | Chr5: 2885322-2885421 | Arabidopsis thaliana |
AT5G09300:CDS:5 | 158 | Chr5: 2885522-2885679 | Arabidopsis thaliana |
AT5G09300:CDS:4 | 183 | Chr5: 2885856-2886038 | Arabidopsis thaliana |
AT5G09300:CDS:2 | 159 | Chr5: 2886133-2886291 | Arabidopsis thaliana |
AT5G09300:CDS:12.1 | 168 | Chr5: 2884282-2884449 | Arabidopsis thaliana |
AT5G09300:CDS:11.1 | 186 | Chr5: 2884544-2884729 | Arabidopsis thaliana |
AT5G09300:CDS:9.1 | 140 | Chr5: 2884815-2884954 | Arabidopsis thaliana |
AT5G09300:CDS:7.1 | 112 | Chr5: 2885055-2885166 | Arabidopsis thaliana |
AT5G09300:CDS:6.1 | 100 | Chr5: 2885322-2885421 | Arabidopsis thaliana |
AT5G09300:CDS:5.1 | 158 | Chr5: 2885522-2885679 | Arabidopsis thaliana |
AT5G09300:CDS:4.1 | 183 | Chr5: 2885856-2886038 | Arabidopsis thaliana |
AT5G09300:CDS:3 | 138 | Chr5: 2886133-2886270 | Arabidopsis thaliana |
AT5G09300:CDS:1 | 234 | Chr5: 2886564-2886797 | Arabidopsis thaliana |
AT5G09300:CDS:10 | 158 | Chr5: 2884797-2884954 | Arabidopsis thaliana |
AT5G09300:CDS:7.2 | 112 | Chr5: 2885055-2885166 | Arabidopsis thaliana |
AT5G09300:CDS:6.2 | 100 | Chr5: 2885322-2885421 | Arabidopsis thaliana |
AT5G09300:CDS:5.2 | 158 | Chr5: 2885522-2885679 | Arabidopsis thaliana |
AT5G09300:CDS:4.2 | 183 | Chr5: 2885856-2886038 | Arabidopsis thaliana |
AT5G09300:CDS:3.1 | 138 | Chr5: 2886133-2886270 | Arabidopsis thaliana |
AT5G09300:CDS:1.1 | 234 | Chr5: 2886564-2886797 | Arabidopsis thaliana |
AT5G09300:CDS:8 | 216 | Chr5: 2884951-2885166 | Arabidopsis thaliana |
AT5G09300:CDS:6.3 | 100 | Chr5: 2885322-2885421 | Arabidopsis thaliana |
AT5G09300:CDS:5.3 | 158 | Chr5: 2885522-2885679 | Arabidopsis thaliana |
AT5G09300:CDS:4.3 | 183 | Chr5: 2885856-2886038 | Arabidopsis thaliana |
AT5G09300:CDS:3.2 | 138 | Chr5: 2886133-2886270 | Arabidopsis thaliana |
AT5G09300:CDS:1.2 | 234 | Chr5: 2886564-2886797 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G09290:exon:8 | 313 | Chr5: 2883917-2884229 | Arabidopsis thaliana |
AT5G09300:exon:3 | 341 | Chr5: 2886133-2886473 | Arabidopsis thaliana |
AT5G09300:exon:13 | 271 | Chr5: 2884179-2884449 | Arabidopsis thaliana |
AT5G09300:exon:12 | 186 | Chr5: 2884544-2884729 | Arabidopsis thaliana |
AT5G09300:exon:10 | 140 | Chr5: 2884815-2884954 | Arabidopsis thaliana |
AT5G09300:exon:11 | 158 | Chr5: 2884797-2884954 | Arabidopsis thaliana |
AT5G09300:exon:8 | 112 | Chr5: 2885055-2885166 | Arabidopsis thaliana |
AT5G09300:exon:1 | 317 | Chr5: 2886564-2886880 | Arabidopsis thaliana |
AT5G09300:exon:9 | 216 | Chr5: 2884951-2885166 | Arabidopsis thaliana |
AT5G09300:exon:7 | 100 | Chr5: 2885322-2885421 | Arabidopsis thaliana |
AT5G09300:exon:6 | 158 | Chr5: 2885522-2885679 | Arabidopsis thaliana |
AT5G09300:exon:5 | 183 | Chr5: 2885856-2886038 | Arabidopsis thaliana |
AT5G09300:exon:4 | 138 | Chr5: 2886133-2886270 | Arabidopsis thaliana |
AT5G09300:exon:2 | 312 | Chr5: 2886564-2886875 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G09300:five_prime_UTR:3 | 182 | Chr5: 2886292-2886473 | Arabidopsis thaliana |
AT5G09300:five_prime_UTR:1 | 83 | Chr5: 2886798-2886880 | Arabidopsis thaliana |
AT5G09300:five_prime_UTR:2 | 78 | Chr5: 2886798-2886875 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G09290 | locus:2184812 | AT5G09290 | 1928 | Chr5: 2882302-2884229 | A. thaliana | Inositol monophosphatase family protein;(source:Araport11) | NULL | Inositol monophosphatase family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G09290.1 | 1301 | Chr5: 2882302-2884229 |
AT5G09300.2 | 1491 | Chr5: 2884179-2886473 |
AT5G09300.1 | 1605 | Chr5: 2884179-2886880 |
AT5G09300.3 | 1166 | Chr5: 2884797-2886880 |
AT5G09300.4 | 1107 | Chr5: 2884951-2886875 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G09290:three_prime_UTR:1 | 131 | Chr5: 2884099-2884229 | Arabidopsis thaliana |
AT5G09300:three_prime_UTR:1 | 103 | Chr5: 2884179-2884281 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
ODBA2_ARATH | function | The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). |
ODBA2_ARATH | similarity | Belongs to the BCKDHA family. |
Function
Gene Ontology
cellular component | |
---|---|
mitochondrial matrix | ECO |
mitochondrion | ECO |
molecular function | |
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | ECO |
metal ion binding | ECO |
biological process | |
branched-chain amino acid catabolic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...