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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07170:CDS:1 | 223 | Chr5: 2222809-2223031 | Arabidopsis thaliana |
AT5G07170:CDS:2 | 72 | Chr5: 2223111-2223182 | Arabidopsis thaliana |
AT5G07170:CDS:3 | 166 | Chr5: 2223251-2223416 | Arabidopsis thaliana |
AT5G07170:CDS:4 | 112 | Chr5: 2223483-2223594 | Arabidopsis thaliana |
AT5G07170:CDS:5 | 48 | Chr5: 2223678-2223725 | Arabidopsis thaliana |
AT5G07170:CDS:6 | 65 | Chr5: 2223803-2223867 | Arabidopsis thaliana |
AT5G07170:CDS:7 | 61 | Chr5: 2223948-2224008 | Arabidopsis thaliana |
AT5G07170:CDS:8 | 66 | Chr5: 2224092-2224157 | Arabidopsis thaliana |
AT5G07170:CDS:9 | 48 | Chr5: 2224241-2224288 | Arabidopsis thaliana |
AT5G07170:CDS:10 | 41 | Chr5: 2224366-2224406 | Arabidopsis thaliana |
AT5G07170:CDS:12 | 115 | Chr5: 2224516-2224630 | Arabidopsis thaliana |
AT5G07170:CDS:13 | 57 | Chr5: 2224723-2224779 | Arabidopsis thaliana |
AT5G07170:CDS:14 | 18 | Chr5: 2224892-2224909 | Arabidopsis thaliana |
AT5G07170:CDS:1.1 | 223 | Chr5: 2222809-2223031 | Arabidopsis thaliana |
AT5G07170:CDS:2.1 | 72 | Chr5: 2223111-2223182 | Arabidopsis thaliana |
AT5G07170:CDS:3.1 | 166 | Chr5: 2223251-2223416 | Arabidopsis thaliana |
AT5G07170:CDS:4.1 | 112 | Chr5: 2223483-2223594 | Arabidopsis thaliana |
AT5G07170:CDS:5.1 | 48 | Chr5: 2223678-2223725 | Arabidopsis thaliana |
AT5G07170:CDS:6.1 | 65 | Chr5: 2223803-2223867 | Arabidopsis thaliana |
AT5G07170:CDS:7.1 | 61 | Chr5: 2223948-2224008 | Arabidopsis thaliana |
AT5G07170:CDS:8.1 | 66 | Chr5: 2224092-2224157 | Arabidopsis thaliana |
AT5G07170:CDS:9.1 | 48 | Chr5: 2224241-2224288 | Arabidopsis thaliana |
AT5G07170:CDS:10.1 | 41 | Chr5: 2224366-2224406 | Arabidopsis thaliana |
AT5G07170:CDS:11 | 106 | Chr5: 2224516-2224621 | Arabidopsis thaliana |
AT5G07170:CDS:13.1 | 57 | Chr5: 2224723-2224779 | Arabidopsis thaliana |
AT5G07170:CDS:14.1 | 18 | Chr5: 2224892-2224909 | Arabidopsis thaliana |
AT5G07175:CDS:5 | 39 | Chr5: 2225258-2225296 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07170:exon:1 | 269 | Chr5: 2222763-2223031 | Arabidopsis thaliana |
AT5G07170:exon:13 | 115 | Chr5: 2224516-2224630 | Arabidopsis thaliana |
AT5G07170:exon:17 | 419 | Chr5: 2225051-2225469 | Arabidopsis thaliana |
AT5G07170:exon:2 | 265 | Chr5: 2222767-2223031 | Arabidopsis thaliana |
AT5G07170:exon:3 | 72 | Chr5: 2223111-2223182 | Arabidopsis thaliana |
AT5G07170:exon:4 | 166 | Chr5: 2223251-2223416 | Arabidopsis thaliana |
AT5G07170:exon:5 | 112 | Chr5: 2223483-2223594 | Arabidopsis thaliana |
AT5G07170:exon:6 | 48 | Chr5: 2223678-2223725 | Arabidopsis thaliana |
AT5G07170:exon:7 | 65 | Chr5: 2223803-2223867 | Arabidopsis thaliana |
AT5G07170:exon:8 | 61 | Chr5: 2223948-2224008 | Arabidopsis thaliana |
AT5G07170:exon:9 | 66 | Chr5: 2224092-2224157 | Arabidopsis thaliana |
AT5G07170:exon:10 | 48 | Chr5: 2224241-2224288 | Arabidopsis thaliana |
AT5G07170:exon:11 | 41 | Chr5: 2224366-2224406 | Arabidopsis thaliana |
AT5G07170:exon:12 | 106 | Chr5: 2224516-2224621 | Arabidopsis thaliana |
AT5G07170:exon:14 | 57 | Chr5: 2224723-2224779 | Arabidopsis thaliana |
AT5G07170:exon:15 | 73 | Chr5: 2224892-2224964 | Arabidopsis thaliana |
AT5G07170:exon:16 | 94 | Chr5: 2225051-2225144 | Arabidopsis thaliana |
AT5G07175:exon:5 | 156 | Chr5: 2225141-2225296 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07170:five_prime_UTR:1 | 46 | Chr5: 2222763-2222808 | Arabidopsis thaliana |
AT5G07170:five_prime_UTR:2 | 42 | Chr5: 2222767-2222808 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G07175 | AT5G07175 | 1160 | Chr5: 2225141-2226300 | A. thaliana | hypothetical protein;(source:Araport11) | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G07170.1 | 1612 | Chr5: 2222763-2225469 |
AT5G07170.2 | 1274 | Chr5: 2222767-2225144 |
AT5G07175.1 | 411 | Chr5: 2225141-2226300 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G07170:three_prime_UTR:3 | 419 | Chr5: 2225051-2225469 | Arabidopsis thaliana |
AT5G07170:three_prime_UTR:1 | 55 | Chr5: 2224910-2224964 | Arabidopsis thaliana |
AT5G07170:three_prime_UTR:2 | 94 | Chr5: 2225051-2225144 | Arabidopsis thaliana |
AT5G07175:three_prime_UTR:1 | 117 | Chr5: 2225141-2225257 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
cortical microtubule | ECO |
nucleus | ECO |
spindle | ECO |
molecular function | |
protein kinase activator activity | ECO |
biological process | |
activation of protein kinase activity | ECO |
regulation of mitotic spindle organization | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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