External Links
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- ATTED-II
- T-DNA Express
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05240:CDS:8 | 106 | Chr5: 1554023-1554128 | Arabidopsis thaliana |
AT5G05240:CDS:7 | 116 | Chr5: 1554225-1554340 | Arabidopsis thaliana |
AT5G05240:CDS:6 | 212 | Chr5: 1554432-1554643 | Arabidopsis thaliana |
AT5G05240:CDS:5 | 63 | Chr5: 1554729-1554791 | Arabidopsis thaliana |
AT5G05240:CDS:3 | 963 | Chr5: 1554876-1555838 | Arabidopsis thaliana |
AT5G05240:CDS:2 | 73 | Chr5: 1555979-1556051 | Arabidopsis thaliana |
AT5G05240:CDS:1 | 60 | Chr5: 1556171-1556230 | Arabidopsis thaliana |
AT5G05240:CDS:8.1 | 106 | Chr5: 1554023-1554128 | Arabidopsis thaliana |
AT5G05240:CDS:7.1 | 116 | Chr5: 1554225-1554340 | Arabidopsis thaliana |
AT5G05240:CDS:6.1 | 212 | Chr5: 1554432-1554643 | Arabidopsis thaliana |
AT5G05240:CDS:5.1 | 63 | Chr5: 1554729-1554791 | Arabidopsis thaliana |
AT5G05240:CDS:4 | 919 | Chr5: 1554876-1555794 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05230:exon:8 | 389 | Chr5: 1553420-1553808 | Arabidopsis thaliana |
AT5G05240:exon:9 | 330 | Chr5: 1553799-1554128 | Arabidopsis thaliana |
AT5G05240:exon:4 | 963 | Chr5: 1554876-1555838 | Arabidopsis thaliana |
AT5G05240:exon:2 | 73 | Chr5: 1555979-1556051 | Arabidopsis thaliana |
AT5G05240:exon:1 | 435 | Chr5: 1556171-1556605 | Arabidopsis thaliana |
AT5G05240:exon:8 | 315 | Chr5: 1553814-1554128 | Arabidopsis thaliana |
AT5G05240:exon:7 | 116 | Chr5: 1554225-1554340 | Arabidopsis thaliana |
AT5G05240:exon:6 | 212 | Chr5: 1554432-1554643 | Arabidopsis thaliana |
AT5G05240:exon:5 | 63 | Chr5: 1554729-1554791 | Arabidopsis thaliana |
AT5G05240:exon:3 | 1055 | Chr5: 1554876-1555930 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05240:five_prime_UTR:1 | 375 | Chr5: 1556231-1556605 | Arabidopsis thaliana |
AT5G05240:five_prime_UTR:2 | 136 | Chr5: 1555795-1555930 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G05230 | locus:2153484 | AT5G05230 | 2511 | Chr5: 1551298-1553808 | A. thaliana | RING/U-box superfamily protein;(source:Araport11) | NULL | RING/U-box superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G05230.1 | 1652 | Chr5: 1551298-1553808 |
AT5G05240.1 | 2192 | Chr5: 1553799-1556605 |
AT5G05240.2 | 1761 | Chr5: 1553814-1555930 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G05230:three_prime_UTR:1 | 265 | Chr5: 1553544-1553808 | Arabidopsis thaliana |
AT5G05240:three_prime_UTR:2 | 224 | Chr5: 1553799-1554022 | Arabidopsis thaliana |
AT5G05240:three_prime_UTR:1 | 209 | Chr5: 1553814-1554022 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...