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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04360:CDS:1 | 240 | Chr5: 1221566-1221805 | Arabidopsis thaliana |
AT5G04360:CDS:2 | 142 | Chr5: 1221897-1222038 | Arabidopsis thaliana |
AT5G04360:CDS:3 | 53 | Chr5: 1222112-1222164 | Arabidopsis thaliana |
AT5G04360:CDS:4 | 109 | Chr5: 1222262-1222370 | Arabidopsis thaliana |
AT5G04360:CDS:5 | 137 | Chr5: 1222520-1222656 | Arabidopsis thaliana |
AT5G04360:CDS:6 | 200 | Chr5: 1222747-1222946 | Arabidopsis thaliana |
AT5G04360:CDS:7 | 150 | Chr5: 1223037-1223186 | Arabidopsis thaliana |
AT5G04360:CDS:8 | 61 | Chr5: 1223476-1223536 | Arabidopsis thaliana |
AT5G04360:CDS:9 | 121 | Chr5: 1223713-1223833 | Arabidopsis thaliana |
AT5G04360:CDS:10 | 91 | Chr5: 1224065-1224155 | Arabidopsis thaliana |
AT5G04360:CDS:11 | 94 | Chr5: 1224234-1224327 | Arabidopsis thaliana |
AT5G04360:CDS:12 | 96 | Chr5: 1224510-1224605 | Arabidopsis thaliana |
AT5G04360:CDS:13 | 141 | Chr5: 1224704-1224844 | Arabidopsis thaliana |
AT5G04360:CDS:14 | 51 | Chr5: 1225036-1225086 | Arabidopsis thaliana |
AT5G04360:CDS:15 | 71 | Chr5: 1225235-1225305 | Arabidopsis thaliana |
AT5G04360:CDS:16 | 93 | Chr5: 1225422-1225514 | Arabidopsis thaliana |
AT5G04360:CDS:17 | 91 | Chr5: 1225648-1225738 | Arabidopsis thaliana |
AT5G04360:CDS:18 | 72 | Chr5: 1226054-1226125 | Arabidopsis thaliana |
AT5G04360:CDS:19 | 57 | Chr5: 1226371-1226427 | Arabidopsis thaliana |
AT5G04360:CDS:20 | 69 | Chr5: 1226514-1226582 | Arabidopsis thaliana |
AT5G04360:CDS:21 | 57 | Chr5: 1226677-1226733 | Arabidopsis thaliana |
AT5G04360:CDS:22 | 75 | Chr5: 1226946-1227020 | Arabidopsis thaliana |
AT5G04360:CDS:23 | 89 | Chr5: 1227162-1227250 | Arabidopsis thaliana |
AT5G04360:CDS:24 | 78 | Chr5: 1227335-1227412 | Arabidopsis thaliana |
AT5G04360:CDS:25 | 139 | Chr5: 1227517-1227655 | Arabidopsis thaliana |
AT5G04360:CDS:26 | 110 | Chr5: 1227872-1227981 | Arabidopsis thaliana |
AT5G04360:CDS:27 | 100 | Chr5: 1228072-1228171 | Arabidopsis thaliana |
AT5G04360:CDS:28 | 111 | Chr5: 1228289-1228399 | Arabidopsis thaliana |
AT5G04360:CDS:1.1 | 240 | Chr5: 1221566-1221805 | Arabidopsis thaliana |
AT5G04360:CDS:2.1 | 142 | Chr5: 1221897-1222038 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04360:exon:1 | 358 | Chr5: 1221448-1221805 | Arabidopsis thaliana |
AT5G04360:exon:29 | 136 | Chr5: 1228289-1228424 | Arabidopsis thaliana |
AT5G04360:exon:31 | 158 | Chr5: 1228565-1228722 | Arabidopsis thaliana |
AT5G04360:exon:2 | 345 | Chr5: 1221461-1221805 | Arabidopsis thaliana |
AT5G04360:exon:3 | 142 | Chr5: 1221897-1222038 | Arabidopsis thaliana |
AT5G04360:exon:4 | 53 | Chr5: 1222112-1222164 | Arabidopsis thaliana |
AT5G04360:exon:5 | 109 | Chr5: 1222262-1222370 | Arabidopsis thaliana |
AT5G04360:exon:6 | 137 | Chr5: 1222520-1222656 | Arabidopsis thaliana |
AT5G04360:exon:7 | 200 | Chr5: 1222747-1222946 | Arabidopsis thaliana |
AT5G04360:exon:8 | 150 | Chr5: 1223037-1223186 | Arabidopsis thaliana |
AT5G04360:exon:9 | 61 | Chr5: 1223476-1223536 | Arabidopsis thaliana |
AT5G04360:exon:10 | 121 | Chr5: 1223713-1223833 | Arabidopsis thaliana |
AT5G04360:exon:11 | 91 | Chr5: 1224065-1224155 | Arabidopsis thaliana |
AT5G04360:exon:12 | 94 | Chr5: 1224234-1224327 | Arabidopsis thaliana |
AT5G04360:exon:13 | 96 | Chr5: 1224510-1224605 | Arabidopsis thaliana |
AT5G04360:exon:14 | 141 | Chr5: 1224704-1224844 | Arabidopsis thaliana |
AT5G04360:exon:15 | 51 | Chr5: 1225036-1225086 | Arabidopsis thaliana |
AT5G04360:exon:16 | 71 | Chr5: 1225235-1225305 | Arabidopsis thaliana |
AT5G04360:exon:17 | 93 | Chr5: 1225422-1225514 | Arabidopsis thaliana |
AT5G04360:exon:18 | 91 | Chr5: 1225648-1225738 | Arabidopsis thaliana |
AT5G04360:exon:19 | 72 | Chr5: 1226054-1226125 | Arabidopsis thaliana |
AT5G04360:exon:20 | 57 | Chr5: 1226371-1226427 | Arabidopsis thaliana |
AT5G04360:exon:21 | 69 | Chr5: 1226514-1226582 | Arabidopsis thaliana |
AT5G04360:exon:22 | 57 | Chr5: 1226677-1226733 | Arabidopsis thaliana |
AT5G04360:exon:23 | 75 | Chr5: 1226946-1227020 | Arabidopsis thaliana |
AT5G04360:exon:24 | 89 | Chr5: 1227162-1227250 | Arabidopsis thaliana |
AT5G04360:exon:25 | 78 | Chr5: 1227335-1227412 | Arabidopsis thaliana |
AT5G04360:exon:26 | 139 | Chr5: 1227517-1227655 | Arabidopsis thaliana |
AT5G04360:exon:27 | 110 | Chr5: 1227872-1227981 | Arabidopsis thaliana |
AT5G04360:exon:28 | 100 | Chr5: 1228072-1228171 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04360:five_prime_UTR:1 | 118 | Chr5: 1221448-1221565 | Arabidopsis thaliana |
AT5G04360:five_prime_UTR:2 | 105 | Chr5: 1221461-1221565 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G04360.1 | 3199 | Chr5: 1221448-1228722 |
AT5G04360.2 | 3445 | Chr5: 1221461-1228841 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G04360:three_prime_UTR:1 | 25 | Chr5: 1228400-1228424 | Arabidopsis thaliana |
AT5G04360:three_prime_UTR:3 | 158 | Chr5: 1228565-1228722 | Arabidopsis thaliana |
AT5G04360:three_prime_UTR:2 | 442 | Chr5: 1228400-1228841 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
PULA1_ARATH | function | Involved in starch degradation and also probably in the trimming of pre-amylopectin chains during starch synthesis. |
PULA1_ARATH | pathway | Glycan biosynthesis; starch biosynthesis. |
PULA1_ARATH | pathway | Glycan degradation; starch degradation. |
PULA1_ARATH | similarity | Belongs to the glycosyl hydrolase 13 family. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast stroma | ECO |
chloroplast | ECO |
molecular function | |
limit dextrinase activity | ECO |
pullulanase activity | ECO |
biological process | |
starch catabolic process | ECO |
starch biosynthetic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...