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Gene : LDA A. thaliana

DB identifier  ? AT5G04360 Secondary Identifier  ? locus:2179919
Name  ? limit dextrinase Brief Description  limit dextrinase
TAIR Computational Description  limit dextrinase;(source:Araport11)
TAIR Curator Summary  Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.
TAIR Short Description  limit dextrinase
TAIR Aliases  ATLDA, ATPU1, LDA, PU1

0 Gene Rifs

1 Organism

23 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 7394  
Location: Chr5:1221448-1228841

Gene models - LDA AT5G04360

? Gene models

Transcripts: 2  Exons: 57  Introns: 55 

Overlapping Features

? Genome features that overlap coordinates of this Gene

33 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PULA1_ARATH function Involved in starch degradation and also probably in the trimming of pre-amylopectin chains during starch synthesis.
PULA1_ARATH pathway Glycan biosynthesis; starch biosynthesis.
PULA1_ARATH pathway Glycan degradation; starch degradation.
PULA1_ARATH similarity Belongs to the glycosyl hydrolase 13 family.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
chloroplast  ? ECO  
molecular function
limit dextrinase activity  ? ECO  
pullulanase activity  ? ECO  
biological process
starch catabolic process  ? ECO  
starch biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets