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Gene : BPC5 A. thaliana

DB identifier  ? AT4G38910 Secondary Identifier  ? locus:2120227
Name  ? basic pentacysteine 5 Brief Description  basic pentacysteine 5
TAIR Computational Description  basic pentacysteine 5;(source:Araport11)
TAIR Curator Summary  Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats.
TAIR Short Description  basic pentacysteine 5
TAIR Aliases  ATBPC5, BBR/BPC5, BPC5

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1893  
Location: Chr4:18145188-18147080 reverse strand

Gene models - BPC5 AT4G38910

? Gene models

Transcripts: 2  Exons: 6  Introns: 4 

Overlapping Features

? Genome features that overlap coordinates of this Gene

7 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BPC5_ARATH BPC5_ARATH-2 function Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.
BPC5_ARATH BPC5_ARATH-2 similarity Belongs to the BBR/BPC family.
BPC5_ARATH BPC5_ARATH-2 tissue specificity Expressed in seedlings, leaves and pistils.

2 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets