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Gene : LARP1c A. thaliana

DB identifier  ? AT4G35890 Secondary Identifier  ? locus:2125334
Name  ? La related protein 1c Brief Description  winged-helix DNA-binding transcription factor family protein
TAIR Computational Description  winged-helix DNA-binding transcription factor family protein;(source:Araport11)
TAIR Curator Summary  Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence. The mRNA is cell-to-cell mobile.
TAIR Short Description  winged-helix DNA-binding transcription factor family protein
TAIR Aliases  AtLARP1c, LARP1c

1 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3806  
Location: Chr4:16997091-17000896

Gene models - LARP1c AT4G35890

? Gene models

Transcripts: 2  Exons: 11  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LRP1C_ARATH function Promotes leaf senescence mediated by abscisic acid (ABA), salicylic acid (SA) and jasmonic acid (MeJA), probably though the induction of expression of senescence-associated genes (SAGs) and defense-related genes.
LRP1C_ARATH similarity Belongs to the LARP family.
LRP1C_ARATH subcellular location Present in cytoplasmic foci.
LRP1C_ARATH tissue specificity Age-dependent accumulation in rosette leaves.

2 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
cytoplasm  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
leaf senescence  ? ECO  
abscisic acid-activated signaling pathway  ? ECO  
response to abscisic acid  ? ECO  
response to salicylic acid  ? ECO  
response to jasmonic acid  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets