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Gene : XTH18 A. thaliana

DB identifier  ? AT4G30280 Secondary Identifier  ? locus:2118746
Name  ? xyloglucan endotransglucosylase/hydrolase 18 Brief Description  xyloglucan endotransglucosylase/hydrolase 18
TAIR Computational Description  xyloglucan endotransglucosylase/hydrolase 18;(source:Araport11)
TAIR Curator Summary  Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.
TAIR Short Description  xyloglucan endotransglucosylase/hydrolase 18
TAIR Aliases  ATXTH18, XTH18

2 Gene Rifs

1 Organism

23 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1455  
Location: Chr4:14825757-14827211 reverse strand

Gene models - XTH18 AT4G30280

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
XTH18_ARATH function Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity).
XTH18_ARATH similarity Belongs to the glycosyl hydrolase 16 family. XTH group 2 subfamily.
XTH18_ARATH tissue specificity Root specific.

1 Proteins

Function

Gene Ontology

cellular component
Golgi apparatus  ? ECO  
apoplast  ? ECO  
molecular function
xyloglucan:xyloglucosyl transferase activity  ? ECO  
hydrolase activity, hydrolyzing O-glycosyl compounds  ? ECO  
polysaccharide binding  ? ECO  
biological process
xyloglucan metabolic process  ? ECO  
cellular response to hypoxia  ? ECO  
cell wall biogenesis  ? ECO  
cell wall organization  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets