External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27120:CDS:9 | 212 | Chr4: 13602210-13602421 | Arabidopsis thaliana |
AT4G27120:CDS:8 | 37 | Chr4: 13602587-13602623 | Arabidopsis thaliana |
AT4G27120:CDS:7 | 57 | Chr4: 13602712-13602768 | Arabidopsis thaliana |
AT4G27120:CDS:6 | 159 | Chr4: 13602983-13603141 | Arabidopsis thaliana |
AT4G27120:CDS:5 | 102 | Chr4: 13603229-13603330 | Arabidopsis thaliana |
AT4G27120:CDS:4 | 110 | Chr4: 13603520-13603629 | Arabidopsis thaliana |
AT4G27120:CDS:2 | 100 | Chr4: 13603908-13604007 | Arabidopsis thaliana |
AT4G27120:CDS:1 | 120 | Chr4: 13604108-13604227 | Arabidopsis thaliana |
AT4G27120:CDS:9.1 | 212 | Chr4: 13602210-13602421 | Arabidopsis thaliana |
AT4G27120:CDS:8.1 | 37 | Chr4: 13602587-13602623 | Arabidopsis thaliana |
AT4G27120:CDS:7.1 | 57 | Chr4: 13602712-13602768 | Arabidopsis thaliana |
AT4G27120:CDS:6.1 | 159 | Chr4: 13602983-13603141 | Arabidopsis thaliana |
AT4G27120:CDS:5.1 | 102 | Chr4: 13603229-13603330 | Arabidopsis thaliana |
AT4G27120:CDS:3 | 123 | Chr4: 13603520-13603642 | Arabidopsis thaliana |
AT4G27120:CDS:9.2 | 212 | Chr4: 13602210-13602421 | Arabidopsis thaliana |
AT4G27120:CDS:8.2 | 37 | Chr4: 13602587-13602623 | Arabidopsis thaliana |
AT4G27120:CDS:7.2 | 57 | Chr4: 13602712-13602768 | Arabidopsis thaliana |
AT4G27120:CDS:6.2 | 159 | Chr4: 13602983-13603141 | Arabidopsis thaliana |
AT4G27120:CDS:5.2 | 102 | Chr4: 13603229-13603330 | Arabidopsis thaliana |
AT4G27120:CDS:4.1 | 110 | Chr4: 13603520-13603629 | Arabidopsis thaliana |
AT4G27120:CDS:2.1 | 100 | Chr4: 13603908-13604007 | Arabidopsis thaliana |
AT4G27120:CDS:1.1 | 120 | Chr4: 13604108-13604227 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27120:exon:3 | 245 | Chr4: 13604108-13604352 | Arabidopsis thaliana |
AT4G27120:exon:13 | 474 | Chr4: 13601948-13602421 | Arabidopsis thaliana |
AT4G27120:exon:6 | 488 | Chr4: 13603520-13604007 | Arabidopsis thaliana |
AT4G27120:exon:2 | 134 | Chr4: 13604332-13604465 | Arabidopsis thaliana |
AT4G27120:exon:12 | 459 | Chr4: 13601963-13602421 | Arabidopsis thaliana |
AT4G27120:exon:11 | 37 | Chr4: 13602587-13602623 | Arabidopsis thaliana |
AT4G27120:exon:10 | 57 | Chr4: 13602712-13602768 | Arabidopsis thaliana |
AT4G27120:exon:9 | 159 | Chr4: 13602983-13603141 | Arabidopsis thaliana |
AT4G27120:exon:8 | 102 | Chr4: 13603229-13603330 | Arabidopsis thaliana |
AT4G27120:exon:7 | 110 | Chr4: 13603520-13603629 | Arabidopsis thaliana |
AT4G27120:exon:5 | 100 | Chr4: 13603908-13604007 | Arabidopsis thaliana |
AT4G27120:exon:4 | 127 | Chr4: 13604108-13604234 | Arabidopsis thaliana |
AT4G27120:exon:1 | 163 | Chr4: 13604332-13604494 | Arabidopsis thaliana |
AT4G27130:exon:5 | 393 | Chr4: 13604466-13604858 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27120:five_prime_UTR:3 | 125 | Chr4: 13604228-13604352 | Arabidopsis thaliana |
AT4G27120:five_prime_UTR:6 | 365 | Chr4: 13603643-13604007 | Arabidopsis thaliana |
AT4G27120:five_prime_UTR:5 | 127 | Chr4: 13604108-13604234 | Arabidopsis thaliana |
AT4G27120:five_prime_UTR:2 | 134 | Chr4: 13604332-13604465 | Arabidopsis thaliana |
AT4G27120:five_prime_UTR:4 | 7 | Chr4: 13604228-13604234 | Arabidopsis thaliana |
AT4G27120:five_prime_UTR:1 | 163 | Chr4: 13604332-13604494 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G27130 | locus:2136462 | AT4G27130 | 2003 | Chr4: 13604466-13606468 | A. thaliana | Translation initiation factor SUI1 family protein;(source:Araport11) | NULL | Translation initiation factor SUI1 family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G27120.1 | 1284 | Chr4: 13601948-13604352 |
AT4G27120.3 | 1578 | Chr4: 13601948-13604465 |
AT4G27120.2 | 1314 | Chr4: 13601963-13604494 |
AT4G27130.1 | 960 | Chr4: 13604466-13606468 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G27120:three_prime_UTR:2 | 262 | Chr4: 13601948-13602209 | Arabidopsis thaliana |
AT4G27120:three_prime_UTR:1 | 247 | Chr4: 13601963-13602209 | Arabidopsis thaliana |
AT4G27130:three_prime_UTR:1 | 348 | Chr4: 13604466-13604813 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
DDRGK_ARATH | function | Substrate adapter for ufmylation, the covalent attachment of the ubiquitin-like modifier UFM1 to substrate proteins. |
DDRGK_ARATH | similarity | Belongs to the DDRGK1 family. |
Function
Gene Ontology
cellular component | |
---|---|
endoplasmic reticulum membrane | ECO |
cytosol | ECO |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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