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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G21660:CDS:17 | 75 | Chr4: 11506259-11506333 | Arabidopsis thaliana |
AT4G21660:CDS:16 | 162 | Chr4: 11506433-11506594 | Arabidopsis thaliana |
AT4G21660:CDS:15 | 105 | Chr4: 11506684-11506788 | Arabidopsis thaliana |
AT4G21660:CDS:14 | 82 | Chr4: 11506906-11506987 | Arabidopsis thaliana |
AT4G21660:CDS:13 | 143 | Chr4: 11507091-11507233 | Arabidopsis thaliana |
AT4G21660:CDS:12 | 63 | Chr4: 11507393-11507455 | Arabidopsis thaliana |
AT4G21660:CDS:11 | 120 | Chr4: 11507554-11507673 | Arabidopsis thaliana |
AT4G21660:CDS:10 | 102 | Chr4: 11507751-11507852 | Arabidopsis thaliana |
AT4G21660:CDS:9 | 87 | Chr4: 11507955-11508041 | Arabidopsis thaliana |
AT4G21660:CDS:8 | 93 | Chr4: 11508133-11508225 | Arabidopsis thaliana |
AT4G21660:CDS:6 | 360 | Chr4: 11508309-11508668 | Arabidopsis thaliana |
AT4G21660:CDS:4 | 108 | Chr4: 11508827-11508934 | Arabidopsis thaliana |
AT4G21660:CDS:3 | 63 | Chr4: 11509031-11509093 | Arabidopsis thaliana |
AT4G21660:CDS:2 | 252 | Chr4: 11509179-11509430 | Arabidopsis thaliana |
AT4G21660:CDS:1 | 222 | Chr4: 11509551-11509772 | Arabidopsis thaliana |
AT4G21660:CDS:17.1 | 75 | Chr4: 11506259-11506333 | Arabidopsis thaliana |
AT4G21660:CDS:16.1 | 162 | Chr4: 11506433-11506594 | Arabidopsis thaliana |
AT4G21660:CDS:15.1 | 105 | Chr4: 11506684-11506788 | Arabidopsis thaliana |
AT4G21660:CDS:14.1 | 82 | Chr4: 11506906-11506987 | Arabidopsis thaliana |
AT4G21660:CDS:13.1 | 143 | Chr4: 11507091-11507233 | Arabidopsis thaliana |
AT4G21660:CDS:12.1 | 63 | Chr4: 11507393-11507455 | Arabidopsis thaliana |
AT4G21660:CDS:11.1 | 120 | Chr4: 11507554-11507673 | Arabidopsis thaliana |
AT4G21660:CDS:10.1 | 102 | Chr4: 11507751-11507852 | Arabidopsis thaliana |
AT4G21660:CDS:9.1 | 87 | Chr4: 11507955-11508041 | Arabidopsis thaliana |
AT4G21660:CDS:8.1 | 93 | Chr4: 11508133-11508225 | Arabidopsis thaliana |
AT4G21660:CDS:7 | 78 | Chr4: 11508309-11508386 | Arabidopsis thaliana |
AT4G21660:CDS:4.1 | 108 | Chr4: 11508827-11508934 | Arabidopsis thaliana |
AT4G21660:CDS:3.1 | 63 | Chr4: 11509031-11509093 | Arabidopsis thaliana |
AT4G21660:CDS:2.1 | 252 | Chr4: 11509179-11509430 | Arabidopsis thaliana |
AT4G21660:CDS:1.1 | 222 | Chr4: 11509551-11509772 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G21660:exon:7 | 360 | Chr4: 11508309-11508668 | Arabidopsis thaliana |
AT4G21660:exon:19 | 511 | Chr4: 11505823-11506333 | Arabidopsis thaliana |
AT4G21660:exon:1 | 357 | Chr4: 11509551-11509907 | Arabidopsis thaliana |
AT4G21660:exon:18 | 320 | Chr4: 11506014-11506333 | Arabidopsis thaliana |
AT4G21660:exon:17 | 162 | Chr4: 11506433-11506594 | Arabidopsis thaliana |
AT4G21660:exon:16 | 105 | Chr4: 11506684-11506788 | Arabidopsis thaliana |
AT4G21660:exon:15 | 82 | Chr4: 11506906-11506987 | Arabidopsis thaliana |
AT4G21660:exon:14 | 143 | Chr4: 11507091-11507233 | Arabidopsis thaliana |
AT4G21660:exon:13 | 63 | Chr4: 11507393-11507455 | Arabidopsis thaliana |
AT4G21660:exon:12 | 120 | Chr4: 11507554-11507673 | Arabidopsis thaliana |
AT4G21660:exon:11 | 102 | Chr4: 11507751-11507852 | Arabidopsis thaliana |
AT4G21660:exon:10 | 87 | Chr4: 11507955-11508041 | Arabidopsis thaliana |
AT4G21660:exon:9 | 93 | Chr4: 11508133-11508225 | Arabidopsis thaliana |
AT4G21660:exon:8 | 78 | Chr4: 11508309-11508386 | Arabidopsis thaliana |
AT4G21660:exon:6 | 42 | Chr4: 11508709-11508750 | Arabidopsis thaliana |
AT4G21660:exon:5 | 108 | Chr4: 11508827-11508934 | Arabidopsis thaliana |
AT4G21660:exon:4 | 63 | Chr4: 11509031-11509093 | Arabidopsis thaliana |
AT4G21660:exon:3 | 252 | Chr4: 11509179-11509430 | Arabidopsis thaliana |
AT4G21660:exon:2 | 292 | Chr4: 11509551-11509842 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G21660:five_prime_UTR:1 | 135 | Chr4: 11509773-11509907 | Arabidopsis thaliana |
AT4G21660:five_prime_UTR:2 | 70 | Chr4: 11509773-11509842 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G21660.3 | 2608 | Chr4: 11505823-11509907 |
AT4G21660.1 | 2326 | Chr4: 11505823-11509907 |
AT4G21660.2 | 2112 | Chr4: 11506014-11509842 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G21660:three_prime_UTR:2 | 436 | Chr4: 11505823-11506258 | Arabidopsis thaliana |
AT4G21660:three_prime_UTR:1 | 245 | Chr4: 11506014-11506258 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
U2 snRNP | ECO |
U2-type spliceosomal complex | ECO |
precatalytic spliceosome | ECO |
catalytic step 2 spliceosome | ECO |
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
mRNA splicing, via spliceosome | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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