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Gene : NCED2 A. thaliana

DB identifier  ? AT4G18350 Secondary Identifier  ? locus:2124489
Name  ? nine-cis-epoxycarotenoid dioxygenase 2 Brief Description  nine-cis-epoxycarotenoid dioxygenase 2
TAIR Computational Description  nine-cis-epoxycarotenoid dioxygenase 2;(source:Araport11)
TAIR Curator Summary  Encodes 9-<i>cis</i>-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.
TAIR Short Description  nine-cis-epoxycarotenoid dioxygenase 2
TAIR Aliases  ATNCED2, NCED2

0 Gene Rifs

1 Organism

17 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2392  
Location: Chr4:10142255-10144646

Gene models - NCED2 AT4G18350

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NCED2_ARATH function Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids.
NCED2_ARATH similarity Belongs to the carotenoid oxygenase family.
NCED2_ARATH subcellular location Partially bound to the thylakoid.
NCED2_ARATH tissue specificity Very low in all tissues. Expressed at the point of organ attachment and the abscission zones in the plant.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast stroma  ? ECO  
chloroplast thylakoid membrane  ? ECO  
molecular function
9-cis-epoxycarotenoid dioxygenase activity  ? ECO  
metal ion binding  ? ECO  
biological process
abscisic acid biosynthetic process  ? ECO  

Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets