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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G18050:CDS:1 | 255 | Chr4: 10022175-10022429 | Arabidopsis thaliana |
AT4G18050:CDS:3 | 55 | Chr4: 10022933-10022987 | Arabidopsis thaliana |
AT4G18050:CDS:4 | 176 | Chr4: 10023066-10023241 | Arabidopsis thaliana |
AT4G18050:CDS:5 | 222 | Chr4: 10023326-10023547 | Arabidopsis thaliana |
AT4G18050:CDS:6 | 239 | Chr4: 10023615-10023853 | Arabidopsis thaliana |
AT4G18050:CDS:7 | 526 | Chr4: 10023934-10024459 | Arabidopsis thaliana |
AT4G18050:CDS:8 | 274 | Chr4: 10024547-10024820 | Arabidopsis thaliana |
AT4G18050:CDS:9 | 634 | Chr4: 10024921-10025554 | Arabidopsis thaliana |
AT4G18050:CDS:10 | 184 | Chr4: 10025681-10025864 | Arabidopsis thaliana |
AT4G18050:CDS:11 | 267 | Chr4: 10025955-10026221 | Arabidopsis thaliana |
AT4G18050:CDS:12 | 264 | Chr4: 10026297-10026560 | Arabidopsis thaliana |
AT4G18050:CDS:13 | 645 | Chr4: 10026636-10027280 | Arabidopsis thaliana |
AT4G18050:CDS:2 | 225 | Chr4: 10022205-10022429 | Arabidopsis thaliana |
AT4G18050:CDS:3.1 | 55 | Chr4: 10022933-10022987 | Arabidopsis thaliana |
AT4G18050:CDS:4.1 | 176 | Chr4: 10023066-10023241 | Arabidopsis thaliana |
AT4G18050:CDS:5.1 | 222 | Chr4: 10023326-10023547 | Arabidopsis thaliana |
AT4G18050:CDS:6.1 | 239 | Chr4: 10023615-10023853 | Arabidopsis thaliana |
AT4G18050:CDS:7.1 | 526 | Chr4: 10023934-10024459 | Arabidopsis thaliana |
AT4G18050:CDS:8.1 | 274 | Chr4: 10024547-10024820 | Arabidopsis thaliana |
AT4G18050:CDS:9.1 | 634 | Chr4: 10024921-10025554 | Arabidopsis thaliana |
AT4G18050:CDS:10.1 | 184 | Chr4: 10025681-10025864 | Arabidopsis thaliana |
AT4G18050:CDS:11.1 | 267 | Chr4: 10025955-10026221 | Arabidopsis thaliana |
AT4G18050:CDS:12.1 | 264 | Chr4: 10026297-10026560 | Arabidopsis thaliana |
AT4G18050:CDS:13.1 | 645 | Chr4: 10026636-10027280 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G18050:exon:1 | 644 | Chr4: 10021786-10022429 | Arabidopsis thaliana |
AT4G18050:exon:13 | 780 | Chr4: 10026636-10027415 | Arabidopsis thaliana |
AT4G18050:exon:2 | 225 | Chr4: 10022205-10022429 | Arabidopsis thaliana |
AT4G18050:exon:3 | 55 | Chr4: 10022933-10022987 | Arabidopsis thaliana |
AT4G18050:exon:4 | 176 | Chr4: 10023066-10023241 | Arabidopsis thaliana |
AT4G18050:exon:5 | 222 | Chr4: 10023326-10023547 | Arabidopsis thaliana |
AT4G18050:exon:6 | 239 | Chr4: 10023615-10023853 | Arabidopsis thaliana |
AT4G18050:exon:7 | 526 | Chr4: 10023934-10024459 | Arabidopsis thaliana |
AT4G18050:exon:8 | 274 | Chr4: 10024547-10024820 | Arabidopsis thaliana |
AT4G18050:exon:9 | 634 | Chr4: 10024921-10025554 | Arabidopsis thaliana |
AT4G18050:exon:10 | 184 | Chr4: 10025681-10025864 | Arabidopsis thaliana |
AT4G18050:exon:11 | 267 | Chr4: 10025955-10026221 | Arabidopsis thaliana |
AT4G18050:exon:12 | 264 | Chr4: 10026297-10026560 | Arabidopsis thaliana |
AT4G18050:exon:14 | 790 | Chr4: 10026636-10027425 | Arabidopsis thaliana |
AT4G18060:exon:10 | 1138 | Chr4: 10026650-10027787 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G18050:five_prime_UTR:1 | 389 | Chr4: 10021786-10022174 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G18060 | locus:2117666 | AT4G18060 | 3384 | Chr4: 10026650-10030033 | A. thaliana | SH3 domain-containing protein;(source:Araport11) | NULL | SH3 domain-containing protein | SH3P3 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G18050.2 | 4265 | Chr4: 10021786-10027415 |
AT4G18050.1 | 3856 | Chr4: 10022205-10027425 |
AT4G18060.1 | 2445 | Chr4: 10026650-10030033 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G18050:three_prime_UTR:1 | 135 | Chr4: 10027281-10027415 | Arabidopsis thaliana |
AT4G18050:three_prime_UTR:2 | 145 | Chr4: 10027281-10027425 | Arabidopsis thaliana |
AT4G18060:three_prime_UTR:1 | 1018 | Chr4: 10026650-10027667 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
AB9B_ARATH | similarity | Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
membrane | ECO |
molecular function | |
ATP binding | ECO |
ATP hydrolysis activity | ECO |
ABC-type transporter activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...