help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : CLPR4 A. thaliana

DB identifier  ? AT4G17040 Secondary Identifier  ? locus:2130449
Name  ? CLP protease R subunit 4 Brief Description  CLP protease R subunit 4
TAIR Computational Description  CLP protease R subunit 4;(source:Araport11)
TAIR Curator Summary  HON5 (At4g17040) encodes the ClpR4 subunit of the chloroplast-localized Clp protease complex. hon mutations disturb plastid protein homeostasis, thereby activating plastid signaling and inducing stress acclimatization.
TAIR Short Description  CLP protease R subunit 4
TAIR Aliases  CLPR4, HON5

2 Gene Rifs

1 Organism

32 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4094  
Location: Chr4:9585283-9589376 reverse strand

Gene models - CLPR4 AT4G17040

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CLPR4_ARATH function Involved in plastid protein homeostasis.
CLPR4_ARATH similarity Belongs to the peptidase S14 family.

1 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
chloroplast envelope  ? ECO  
chloroplast stroma  ? ECO  
plastid  ? ECO  
chloroplast  ? ECO  
plastid stroma  ? ECO  
molecular function
ATP-dependent peptidase activity  ? ECO  
serine-type endopeptidase activity  ? ECO  
biological process
regulation of gene expression  ? ECO  
proteolysis  ? ECO  
response to reactive oxygen species  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets