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Gene : SIP2;1 A. thaliana

DB identifier  ? AT3G56950 Secondary Identifier  ? locus:2080570
Name  ? small and basic intrinsic protein 2;1 Brief Description  small and basic intrinsic protein 2;1
TAIR Computational Description  small and basic intrinsic protein 2;(source:Araport11)
TAIR Curator Summary  One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER. Probably involved in the alleviation of ER stress; the lack of SIP2;1 reduces both pollen germination and pollen tube elongation.
TAIR Short Description  small and basic intrinsic protein 2;1
TAIR Aliases  SIP2, SIP2;1

1 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1629  
Location: Chr3:21078297-21079925 reverse strand

Gene models - SIP2;1 AT3G56950

? Gene models

Transcripts: 2  Exons: 7  Introns: 5 

Overlapping Features

? Genome features that overlap coordinates of this Gene

8 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SIP21_ARATH function Water channel required to facilitate the transport of water across cell membrane. Inactive in yeast cells.
F4J0V0_ARATH similarity Belongs to the MIP/aquaporin (TC 1.A.8) family.
SIP21_ARATH similarity Belongs to the MIP/aquaporin (TC 1.A.8) family. SIP (TC 1.A.8.10) subfamily.
SIP21_ARATH tissue specificity Expressed in dividing cells and elongating regions of the root tips, emerging lateral roots, root steles, cotyledons, main veins of the rosette leaves, vascular tissues of the flower petals, stigma, stamens (anthers and filaments), pollen and the top and bottom (receptacle) of siliques.

2 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum membrane  ? ECO  
molecular function
channel activity  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets