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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 24, Exons: 14, Five Prime UTRs: 3, mRNAs: 2, Transposable Elements: 2, Transposon Fragments: 2
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54830:CDS:12 | 83 | Chr3: 20311901-20311983 | Arabidopsis thaliana |
AT3G54830:CDS:11 | 76 | Chr3: 20312072-20312147 | Arabidopsis thaliana |
AT3G54830:CDS:10 | 44 | Chr3: 20312239-20312282 | Arabidopsis thaliana |
AT3G54830:CDS:9 | 123 | Chr3: 20312355-20312477 | Arabidopsis thaliana |
AT3G54830:CDS:8 | 64 | Chr3: 20312569-20312632 | Arabidopsis thaliana |
AT3G54830:CDS:7 | 136 | Chr3: 20312754-20312889 | Arabidopsis thaliana |
AT3G54830:CDS:6 | 220 | Chr3: 20312982-20313201 | Arabidopsis thaliana |
AT3G54830:CDS:5 | 181 | Chr3: 20313281-20313461 | Arabidopsis thaliana |
AT3G54830:CDS:4 | 24 | Chr3: 20313821-20313844 | Arabidopsis thaliana |
AT3G54830:CDS:3 | 215 | Chr3: 20313944-20314158 | Arabidopsis thaliana |
AT3G54830:CDS:2 | 287 | Chr3: 20314471-20314757 | Arabidopsis thaliana |
AT3G54830:CDS:1 | 188 | Chr3: 20314843-20315030 | Arabidopsis thaliana |
AT3G54830:CDS:12.1 | 83 | Chr3: 20311901-20311983 | Arabidopsis thaliana |
AT3G54830:CDS:11.1 | 76 | Chr3: 20312072-20312147 | Arabidopsis thaliana |
AT3G54830:CDS:10.1 | 44 | Chr3: 20312239-20312282 | Arabidopsis thaliana |
AT3G54830:CDS:9.1 | 123 | Chr3: 20312355-20312477 | Arabidopsis thaliana |
AT3G54830:CDS:8.1 | 64 | Chr3: 20312569-20312632 | Arabidopsis thaliana |
AT3G54830:CDS:7.1 | 136 | Chr3: 20312754-20312889 | Arabidopsis thaliana |
AT3G54830:CDS:6.1 | 220 | Chr3: 20312982-20313201 | Arabidopsis thaliana |
AT3G54830:CDS:5.1 | 181 | Chr3: 20313281-20313461 | Arabidopsis thaliana |
AT3G54830:CDS:4.1 | 24 | Chr3: 20313821-20313844 | Arabidopsis thaliana |
AT3G54830:CDS:3.1 | 215 | Chr3: 20313944-20314158 | Arabidopsis thaliana |
AT3G54830:CDS:2.1 | 287 | Chr3: 20314471-20314757 | Arabidopsis thaliana |
AT3G54830:CDS:1.1 | 188 | Chr3: 20314843-20315030 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54830:exon:2 | 322 | Chr3: 20314843-20315164 | Arabidopsis thaliana |
AT3G54830:exon:14 | 83 | Chr3: 20311901-20311983 | Arabidopsis thaliana |
AT3G54830:exon:13 | 76 | Chr3: 20312072-20312147 | Arabidopsis thaliana |
AT3G54830:exon:12 | 44 | Chr3: 20312239-20312282 | Arabidopsis thaliana |
AT3G54830:exon:11 | 123 | Chr3: 20312355-20312477 | Arabidopsis thaliana |
AT3G54830:exon:10 | 64 | Chr3: 20312569-20312632 | Arabidopsis thaliana |
AT3G54830:exon:9 | 136 | Chr3: 20312754-20312889 | Arabidopsis thaliana |
AT3G54830:exon:8 | 220 | Chr3: 20312982-20313201 | Arabidopsis thaliana |
AT3G54830:exon:7 | 181 | Chr3: 20313281-20313461 | Arabidopsis thaliana |
AT3G54830:exon:6 | 24 | Chr3: 20313821-20313844 | Arabidopsis thaliana |
AT3G54830:exon:5 | 215 | Chr3: 20313944-20314158 | Arabidopsis thaliana |
AT3G54830:exon:4 | 287 | Chr3: 20314471-20314757 | Arabidopsis thaliana |
AT3G54830:exon:3 | 242 | Chr3: 20314843-20315084 | Arabidopsis thaliana |
AT3G54830:exon:1 | 63 | Chr3: 20315825-20315887 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G54830:five_prime_UTR:2 | 134 | Chr3: 20315031-20315164 | Arabidopsis thaliana |
AT3G54830:five_prime_UTR:3 | 54 | Chr3: 20315031-20315084 | Arabidopsis thaliana |
AT3G54830:five_prime_UTR:1 | 63 | Chr3: 20315825-20315887 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G54830.1 | 1775 | Chr3: 20311901-20315164 |
AT3G54830.2 | 1758 | Chr3: 20311901-20315887 |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE82570 | 27 | Chr3: 20315225-20315251 | Arabidopsis thaliana |
AT3TE82575 | 939 | Chr3: 20315252-20316190 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3TE82570:transposon_fragment:1 | 27 | Chr3: 20315225-20315251 | Arabidopsis thaliana |
AT3TE82575:transposon_fragment:1 | 939 | Chr3: 20315252-20316190 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
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No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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