External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51270:CDS:1 | 84 | Chr3: 19033851-19033934 | Arabidopsis thaliana |
AT3G51270:CDS:2 | 47 | Chr3: 19034053-19034099 | Arabidopsis thaliana |
AT3G51270:CDS:3 | 71 | Chr3: 19034193-19034263 | Arabidopsis thaliana |
AT3G51270:CDS:4 | 114 | Chr3: 19034382-19034495 | Arabidopsis thaliana |
AT3G51270:CDS:5 | 176 | Chr3: 19034593-19034768 | Arabidopsis thaliana |
AT3G51270:CDS:6 | 65 | Chr3: 19034868-19034932 | Arabidopsis thaliana |
AT3G51270:CDS:8 | 118 | Chr3: 19035181-19035298 | Arabidopsis thaliana |
AT3G51270:CDS:9 | 74 | Chr3: 19035493-19035566 | Arabidopsis thaliana |
AT3G51270:CDS:10 | 48 | Chr3: 19035660-19035707 | Arabidopsis thaliana |
AT3G51270:CDS:11 | 163 | Chr3: 19035853-19036015 | Arabidopsis thaliana |
AT3G51270:CDS:12 | 132 | Chr3: 19036197-19036328 | Arabidopsis thaliana |
AT3G51270:CDS:14 | 114 | Chr3: 19036419-19036532 | Arabidopsis thaliana |
AT3G51270:CDS:15 | 171 | Chr3: 19036602-19036772 | Arabidopsis thaliana |
AT3G51270:CDS:1.1 | 84 | Chr3: 19033851-19033934 | Arabidopsis thaliana |
AT3G51270:CDS:2.1 | 47 | Chr3: 19034053-19034099 | Arabidopsis thaliana |
AT3G51270:CDS:3.1 | 71 | Chr3: 19034193-19034263 | Arabidopsis thaliana |
AT3G51270:CDS:4.1 | 114 | Chr3: 19034382-19034495 | Arabidopsis thaliana |
AT3G51270:CDS:5.1 | 176 | Chr3: 19034593-19034768 | Arabidopsis thaliana |
AT3G51270:CDS:7 | 89 | Chr3: 19034868-19034956 | Arabidopsis thaliana |
AT3G51270:CDS:8.1 | 118 | Chr3: 19035181-19035298 | Arabidopsis thaliana |
AT3G51270:CDS:9.1 | 74 | Chr3: 19035493-19035566 | Arabidopsis thaliana |
AT3G51270:CDS:10.1 | 48 | Chr3: 19035660-19035707 | Arabidopsis thaliana |
AT3G51270:CDS:11.1 | 163 | Chr3: 19035853-19036015 | Arabidopsis thaliana |
AT3G51270:CDS:12.1 | 132 | Chr3: 19036197-19036328 | Arabidopsis thaliana |
AT3G51270:CDS:13 | 99 | Chr3: 19036419-19036517 | Arabidopsis thaliana |
AT3G51270:CDS:15.1 | 171 | Chr3: 19036602-19036772 | Arabidopsis thaliana |
AT3G51270:CDS:1.2 | 84 | Chr3: 19033851-19033934 | Arabidopsis thaliana |
AT3G51270:CDS:2.2 | 47 | Chr3: 19034053-19034099 | Arabidopsis thaliana |
AT3G51270:CDS:3.2 | 71 | Chr3: 19034193-19034263 | Arabidopsis thaliana |
AT3G51270:CDS:4.2 | 114 | Chr3: 19034382-19034495 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51270:exon:1 | 70 | Chr3: 19033542-19033611 | Arabidopsis thaliana |
AT3G51270:exon:11 | 65 | Chr3: 19034868-19034932 | Arabidopsis thaliana |
AT3G51270:exon:19 | 114 | Chr3: 19036419-19036532 | Arabidopsis thaliana |
AT3G51270:exon:21 | 345 | Chr3: 19036602-19036946 | Arabidopsis thaliana |
AT3G51270:exon:2 | 57 | Chr3: 19033555-19033611 | Arabidopsis thaliana |
AT3G51270:exon:22 | 411 | Chr3: 19036602-19037012 | Arabidopsis thaliana |
AT3G51270:exon:3 | 44 | Chr3: 19033568-19033611 | Arabidopsis thaliana |
AT3G51270:exon:6 | 129 | Chr3: 19033806-19033934 | Arabidopsis thaliana |
AT3G51270:exon:4 | 82 | Chr3: 19033615-19033696 | Arabidopsis thaliana |
AT3G51270:exon:5 | 133 | Chr3: 19033802-19033934 | Arabidopsis thaliana |
AT3G51270:exon:7 | 47 | Chr3: 19034053-19034099 | Arabidopsis thaliana |
AT3G51270:exon:8 | 71 | Chr3: 19034193-19034263 | Arabidopsis thaliana |
AT3G51270:exon:9 | 114 | Chr3: 19034382-19034495 | Arabidopsis thaliana |
AT3G51270:exon:10 | 176 | Chr3: 19034593-19034768 | Arabidopsis thaliana |
AT3G51270:exon:12 | 89 | Chr3: 19034868-19034956 | Arabidopsis thaliana |
AT3G51270:exon:13 | 118 | Chr3: 19035181-19035298 | Arabidopsis thaliana |
AT3G51270:exon:14 | 74 | Chr3: 19035493-19035566 | Arabidopsis thaliana |
AT3G51270:exon:15 | 48 | Chr3: 19035660-19035707 | Arabidopsis thaliana |
AT3G51270:exon:16 | 163 | Chr3: 19035853-19036015 | Arabidopsis thaliana |
AT3G51270:exon:17 | 132 | Chr3: 19036197-19036328 | Arabidopsis thaliana |
AT3G51270:exon:18 | 99 | Chr3: 19036419-19036517 | Arabidopsis thaliana |
AT3G51270:exon:20 | 331 | Chr3: 19036602-19036932 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51270:five_prime_UTR:1 | 70 | Chr3: 19033542-19033611 | Arabidopsis thaliana |
AT3G51270:five_prime_UTR:2 | 57 | Chr3: 19033555-19033611 | Arabidopsis thaliana |
AT3G51270:five_prime_UTR:3 | 44 | Chr3: 19033568-19033611 | Arabidopsis thaliana |
AT3G51270:five_prime_UTR:6 | 45 | Chr3: 19033806-19033850 | Arabidopsis thaliana |
AT3G51270:five_prime_UTR:4 | 82 | Chr3: 19033615-19033696 | Arabidopsis thaliana |
AT3G51270:five_prime_UTR:5 | 49 | Chr3: 19033802-19033850 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G51270.2 | 1670 | Chr3: 19033542-19036946 |
AT3G51270.1 | 1732 | Chr3: 19033555-19037012 |
AT3G51270.3 | 1635 | Chr3: 19033568-19036932 |
AT3G51270.4 | 1677 | Chr3: 19033615-19036932 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G51270:three_prime_UTR:2 | 174 | Chr3: 19036773-19036946 | Arabidopsis thaliana |
AT3G51270:three_prime_UTR:3 | 240 | Chr3: 19036773-19037012 | Arabidopsis thaliana |
AT3G51270:three_prime_UTR:1 | 160 | Chr3: 19036773-19036932 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
F4J3B0_ARATH F4J3A9_ARATH | similarity | Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
metal ion binding | ECO |
biological process | |
protein phosphorylation | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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