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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G20250:CDS:11 | 35 | Chr3: 7059098-7059132 | Arabidopsis thaliana |
AT3G20250:CDS:10 | 172 | Chr3: 7059217-7059388 | Arabidopsis thaliana |
AT3G20250:CDS:9 | 195 | Chr3: 7059460-7059654 | Arabidopsis thaliana |
AT3G20250:CDS:8 | 111 | Chr3: 7059748-7059858 | Arabidopsis thaliana |
AT3G20250:CDS:7 | 213 | Chr3: 7059941-7060153 | Arabidopsis thaliana |
AT3G20250:CDS:6 | 108 | Chr3: 7060255-7060362 | Arabidopsis thaliana |
AT3G20250:CDS:5 | 142 | Chr3: 7060441-7060582 | Arabidopsis thaliana |
AT3G20250:CDS:3 | 1277 | Chr3: 7060700-7061976 | Arabidopsis thaliana |
AT3G20250:CDS:1 | 597 | Chr3: 7062064-7062660 | Arabidopsis thaliana |
AT3G20250:CDS:11.1 | 35 | Chr3: 7059098-7059132 | Arabidopsis thaliana |
AT3G20250:CDS:10.1 | 172 | Chr3: 7059217-7059388 | Arabidopsis thaliana |
AT3G20250:CDS:9.1 | 195 | Chr3: 7059460-7059654 | Arabidopsis thaliana |
AT3G20250:CDS:8.1 | 111 | Chr3: 7059748-7059858 | Arabidopsis thaliana |
AT3G20250:CDS:7.1 | 213 | Chr3: 7059941-7060153 | Arabidopsis thaliana |
AT3G20250:CDS:6.1 | 108 | Chr3: 7060255-7060362 | Arabidopsis thaliana |
AT3G20250:CDS:5.1 | 142 | Chr3: 7060441-7060582 | Arabidopsis thaliana |
AT3G20250:CDS:3.1 | 1277 | Chr3: 7060700-7061976 | Arabidopsis thaliana |
AT3G20250:CDS:1.1 | 597 | Chr3: 7062064-7062660 | Arabidopsis thaliana |
AT3G20250:CDS:11.2 | 35 | Chr3: 7059098-7059132 | Arabidopsis thaliana |
AT3G20250:CDS:10.2 | 172 | Chr3: 7059217-7059388 | Arabidopsis thaliana |
AT3G20250:CDS:9.2 | 195 | Chr3: 7059460-7059654 | Arabidopsis thaliana |
AT3G20250:CDS:8.2 | 111 | Chr3: 7059748-7059858 | Arabidopsis thaliana |
AT3G20250:CDS:7.2 | 213 | Chr3: 7059941-7060153 | Arabidopsis thaliana |
AT3G20250:CDS:6.2 | 108 | Chr3: 7060255-7060362 | Arabidopsis thaliana |
AT3G20250:CDS:5.2 | 142 | Chr3: 7060441-7060582 | Arabidopsis thaliana |
AT3G20250:CDS:4 | 701 | Chr3: 7060700-7061400 | Arabidopsis thaliana |
AT3G20250:CDS:2 | 468 | Chr3: 7061509-7061976 | Arabidopsis thaliana |
AT3G20250:CDS:1.2 | 597 | Chr3: 7062064-7062660 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G20240:exon:5 | 491 | Chr3: 7058460-7058950 | Arabidopsis thaliana |
AT3G20250:exon:14 | 262 | Chr3: 7058871-7059132 | Arabidopsis thaliana |
AT3G20250:exon:5 | 1277 | Chr3: 7060700-7061976 | Arabidopsis thaliana |
AT3G20250:exon:2 | 286 | Chr3: 7062878-7063163 | Arabidopsis thaliana |
AT3G20250:exon:13 | 231 | Chr3: 7058902-7059132 | Arabidopsis thaliana |
AT3G20250:exon:12 | 172 | Chr3: 7059217-7059388 | Arabidopsis thaliana |
AT3G20250:exon:11 | 195 | Chr3: 7059460-7059654 | Arabidopsis thaliana |
AT3G20250:exon:10 | 111 | Chr3: 7059748-7059858 | Arabidopsis thaliana |
AT3G20250:exon:9 | 213 | Chr3: 7059941-7060153 | Arabidopsis thaliana |
AT3G20250:exon:8 | 108 | Chr3: 7060255-7060362 | Arabidopsis thaliana |
AT3G20250:exon:7 | 142 | Chr3: 7060441-7060582 | Arabidopsis thaliana |
AT3G20250:exon:6 | 701 | Chr3: 7060700-7061400 | Arabidopsis thaliana |
AT3G20250:exon:4 | 468 | Chr3: 7061509-7061976 | Arabidopsis thaliana |
AT3G20250:exon:3 | 650 | Chr3: 7062064-7062713 | Arabidopsis thaliana |
AT3G20250:exon:1 | 210 | Chr3: 7063163-7063372 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G20250:five_prime_UTR:2 | 286 | Chr3: 7062878-7063163 | Arabidopsis thaliana |
AT3G20250:five_prime_UTR:3 | 53 | Chr3: 7062661-7062713 | Arabidopsis thaliana |
AT3G20250:five_prime_UTR:1 | 210 | Chr3: 7063163-7063372 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G20240 | locus:2087545 | AT3G20240 | 2048 | Chr3: 7056903-7058950 | A. thaliana | Mitochondrial substrate carrier family protein;(source:Araport11) | NULL | Mitochondrial substrate carrier family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G20240.1 | 1570 | Chr3: 7056903-7058950 |
AT3G20250.2 | 3340 | Chr3: 7058871-7063372 |
AT3G20250.3 | 3385 | Chr3: 7058902-7063163 |
AT3G20250.1 | 3201 | Chr3: 7058902-7063372 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G20240:three_prime_UTR:1 | 234 | Chr3: 7058717-7058950 | Arabidopsis thaliana |
AT3G20250:three_prime_UTR:2 | 227 | Chr3: 7058871-7059097 | Arabidopsis thaliana |
AT3G20250:three_prime_UTR:1 | 196 | Chr3: 7058902-7059097 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
RNA binding | ECO |
biological process | |
regulation of translation | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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