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Gene : PUM5 A. thaliana

DB identifier  ? AT3G20250 Secondary Identifier  ? locus:2087560
Name  ? pumilio 5 Brief Description  pumilio 5
TAIR Computational Description  pumilio 5;(source:Araport11)
TAIR Curator Summary  Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. APUM5 is involved in susceptibility to CMV and is not required for bacterial or fungal pathogen resistance although its expression is induced upon bacterial and fungal infection. It is involved in the osmotic, salt, and drought stress responses.
TAIR Short Description  pumilio 5
TAIR Aliases  APUM5, PUM5

2 Gene Rifs

1 Organism

19 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4502  
Location: Chr3:7058871-7063372 reverse strand

Gene models - PUM5 AT3G20250

? Gene models

Transcripts: 3  Exons: 31  Introns: 28 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

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2 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
RNA binding  ? ECO  
biological process
regulation of translation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


25 Homologues

 

Other

9 Data Sets