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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G17590:CDS:11 |
100
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Chr3: 6017313-6017412 | Arabidopsis thaliana |
AT3G17590:CDS:10 |
63
![]() |
Chr3: 6017895-6017957 | Arabidopsis thaliana |
AT3G17590:CDS:9 |
83
![]() |
Chr3: 6018060-6018142 | Arabidopsis thaliana |
AT3G17590:CDS:8 |
39
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Chr3: 6018268-6018306 | Arabidopsis thaliana |
AT3G17590:CDS:7 |
84
![]() |
Chr3: 6018410-6018493 | Arabidopsis thaliana |
AT3G17590:CDS:6 |
48
![]() |
Chr3: 6018576-6018623 | Arabidopsis thaliana |
AT3G17590:CDS:5 |
72
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Chr3: 6018736-6018807 | Arabidopsis thaliana |
AT3G17590:CDS:4 |
95
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Chr3: 6019148-6019242 | Arabidopsis thaliana |
AT3G17590:CDS:3 |
89
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Chr3: 6019352-6019440 | Arabidopsis thaliana |
AT3G17590:CDS:1 |
50
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Chr3: 6019542-6019591 | Arabidopsis thaliana |
AT3G17590:CDS:11.1 |
100
![]() |
Chr3: 6017313-6017412 | Arabidopsis thaliana |
AT3G17590:CDS:10.1 |
63
![]() |
Chr3: 6017895-6017957 | Arabidopsis thaliana |
AT3G17590:CDS:9.1 |
83
![]() |
Chr3: 6018060-6018142 | Arabidopsis thaliana |
AT3G17590:CDS:7.1 |
84
![]() |
Chr3: 6018410-6018493 | Arabidopsis thaliana |
AT3G17590:CDS:6.1 |
48
![]() |
Chr3: 6018576-6018623 | Arabidopsis thaliana |
AT3G17590:CDS:5.1 |
72
![]() |
Chr3: 6018736-6018807 | Arabidopsis thaliana |
AT3G17590:CDS:4.1 |
95
![]() |
Chr3: 6019148-6019242 | Arabidopsis thaliana |
AT3G17590:CDS:3.1 |
89
![]() |
Chr3: 6019352-6019440 | Arabidopsis thaliana |
AT3G17590:CDS:1.1 |
50
![]() |
Chr3: 6019542-6019591 | Arabidopsis thaliana |
AT3G17590:CDS:11.2 |
100
![]() |
Chr3: 6017313-6017412 | Arabidopsis thaliana |
AT3G17590:CDS:10.2 |
63
![]() |
Chr3: 6017895-6017957 | Arabidopsis thaliana |
AT3G17590:CDS:9.2 |
83
![]() |
Chr3: 6018060-6018142 | Arabidopsis thaliana |
AT3G17590:CDS:8.1 |
39
![]() |
Chr3: 6018268-6018306 | Arabidopsis thaliana |
AT3G17590:CDS:7.2 |
84
![]() |
Chr3: 6018410-6018493 | Arabidopsis thaliana |
AT3G17590:CDS:6.2 |
48
![]() |
Chr3: 6018576-6018623 | Arabidopsis thaliana |
AT3G17590:CDS:5.2 |
72
![]() |
Chr3: 6018736-6018807 | Arabidopsis thaliana |
AT3G17590:CDS:4.2 |
95
![]() |
Chr3: 6019148-6019242 | Arabidopsis thaliana |
AT3G17590:CDS:2 |
95
![]() |
Chr3: 6019352-6019446 | Arabidopsis thaliana |
AT3G17590:CDS:1.2 |
50
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Chr3: 6019542-6019591 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G17590:exon:13 |
247
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Chr3: 6017166-6017412 | Arabidopsis thaliana |
AT3G17590:exon:4 |
89
![]() |
Chr3: 6019352-6019440 | Arabidopsis thaliana |
AT3G17590:exon:1 |
183
![]() |
Chr3: 6019542-6019724 | Arabidopsis thaliana |
AT3G17590:exon:12 |
201
![]() |
Chr3: 6017212-6017412 | Arabidopsis thaliana |
AT3G17590:exon:11 |
63
![]() |
Chr3: 6017895-6017957 | Arabidopsis thaliana |
AT3G17590:exon:10 |
83
![]() |
Chr3: 6018060-6018142 | Arabidopsis thaliana |
AT3G17590:exon:9 |
39
![]() |
Chr3: 6018268-6018306 | Arabidopsis thaliana |
AT3G17590:exon:8 |
84
![]() |
Chr3: 6018410-6018493 | Arabidopsis thaliana |
AT3G17590:exon:7 |
48
![]() |
Chr3: 6018576-6018623 | Arabidopsis thaliana |
AT3G17590:exon:6 |
72
![]() |
Chr3: 6018736-6018807 | Arabidopsis thaliana |
AT3G17590:exon:5 |
95
![]() |
Chr3: 6019148-6019242 | Arabidopsis thaliana |
AT3G17590:exon:3 |
95
![]() |
Chr3: 6019352-6019446 | Arabidopsis thaliana |
AT3G17590:exon:2 |
125
![]() |
Chr3: 6019542-6019666 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G17590:five_prime_UTR:1 |
133
![]() |
Chr3: 6019592-6019724 | Arabidopsis thaliana |
AT3G17590:five_prime_UTR:2 |
75
![]() |
Chr3: 6019592-6019666 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G17590.1 |
1003
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Chr3: 6017166-6019724 |
AT3G17590.3 |
964
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Chr3: 6017166-6019724 |
AT3G17590.2 |
905
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Chr3: 6017212-6019666 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G17590:three_prime_UTR:2 |
147
![]() |
Chr3: 6017166-6017312 | Arabidopsis thaliana |
AT3G17590:three_prime_UTR:1 |
101
![]() |
Chr3: 6017212-6017312 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
BSH_ARATH | function | Component of a multiprotein complex equivalent of the yeast SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors. |
A0A1I9LPZ2_ARATH F4J581_ARATH BSH_ARATH | similarity | Belongs to the SNF5 family. |
BSH_ARATH | tissue specificity | Expressed in roots, stems, leaves, flowers and siliques. |