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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G10010:CDS:20 | 113 | Chr3: 3081999-3082111 | Arabidopsis thaliana |
AT3G10010:CDS:19 | 39 | Chr3: 3082326-3082364 | Arabidopsis thaliana |
AT3G10010:CDS:18 | 115 | Chr3: 3082457-3082571 | Arabidopsis thaliana |
AT3G10010:CDS:17 | 66 | Chr3: 3082659-3082724 | Arabidopsis thaliana |
AT3G10010:CDS:16 | 143 | Chr3: 3082813-3082955 | Arabidopsis thaliana |
AT3G10010:CDS:15 | 58 | Chr3: 3083093-3083150 | Arabidopsis thaliana |
AT3G10010:CDS:14 | 37 | Chr3: 3083235-3083271 | Arabidopsis thaliana |
AT3G10010:CDS:13 | 444 | Chr3: 3083369-3083812 | Arabidopsis thaliana |
AT3G10010:CDS:12 | 83 | Chr3: 3083944-3084026 | Arabidopsis thaliana |
AT3G10010:CDS:11 | 37 | Chr3: 3084095-3084131 | Arabidopsis thaliana |
AT3G10010:CDS:10 | 69 | Chr3: 3084215-3084283 | Arabidopsis thaliana |
AT3G10010:CDS:9 | 92 | Chr3: 3084368-3084459 | Arabidopsis thaliana |
AT3G10010:CDS:8 | 85 | Chr3: 3084545-3084629 | Arabidopsis thaliana |
AT3G10010:CDS:7 | 80 | Chr3: 3084764-3084843 | Arabidopsis thaliana |
AT3G10010:CDS:6 | 787 | Chr3: 3084925-3085711 | Arabidopsis thaliana |
AT3G10010:CDS:5 | 91 | Chr3: 3085796-3085886 | Arabidopsis thaliana |
AT3G10010:CDS:4 | 360 | Chr3: 3086002-3086361 | Arabidopsis thaliana |
AT3G10010:CDS:3 | 951 | Chr3: 3086447-3087397 | Arabidopsis thaliana |
AT3G10010:CDS:2 | 209 | Chr3: 3087568-3087776 | Arabidopsis thaliana |
AT3G10010:CDS:1 | 140 | Chr3: 3088056-3088195 | Arabidopsis thaliana |
AT3G10010:CDS:20.1 | 113 | Chr3: 3081999-3082111 | Arabidopsis thaliana |
AT3G10010:CDS:19.1 | 39 | Chr3: 3082326-3082364 | Arabidopsis thaliana |
AT3G10010:CDS:18.1 | 115 | Chr3: 3082457-3082571 | Arabidopsis thaliana |
AT3G10010:CDS:17.1 | 66 | Chr3: 3082659-3082724 | Arabidopsis thaliana |
AT3G10010:CDS:16.1 | 143 | Chr3: 3082813-3082955 | Arabidopsis thaliana |
AT3G10010:CDS:15.1 | 58 | Chr3: 3083093-3083150 | Arabidopsis thaliana |
AT3G10010:CDS:14.1 | 37 | Chr3: 3083235-3083271 | Arabidopsis thaliana |
AT3G10010:CDS:13.1 | 444 | Chr3: 3083369-3083812 | Arabidopsis thaliana |
AT3G10010:CDS:12.1 | 83 | Chr3: 3083944-3084026 | Arabidopsis thaliana |
AT3G10010:CDS:11.1 | 37 | Chr3: 3084095-3084131 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G10010:exon:23 | 377 | Chr3: 3081735-3082111 | Arabidopsis thaliana |
AT3G10010:exon:2 | 195 | Chr3: 3088056-3088250 | Arabidopsis thaliana |
AT3G10010:exon:1 | 75 | Chr3: 3088476-3088550 | Arabidopsis thaliana |
AT3G10010:exon:22 | 298 | Chr3: 3081814-3082111 | Arabidopsis thaliana |
AT3G10010:exon:21 | 39 | Chr3: 3082326-3082364 | Arabidopsis thaliana |
AT3G10010:exon:20 | 115 | Chr3: 3082457-3082571 | Arabidopsis thaliana |
AT3G10010:exon:19 | 66 | Chr3: 3082659-3082724 | Arabidopsis thaliana |
AT3G10010:exon:18 | 143 | Chr3: 3082813-3082955 | Arabidopsis thaliana |
AT3G10010:exon:17 | 58 | Chr3: 3083093-3083150 | Arabidopsis thaliana |
AT3G10010:exon:16 | 37 | Chr3: 3083235-3083271 | Arabidopsis thaliana |
AT3G10010:exon:15 | 444 | Chr3: 3083369-3083812 | Arabidopsis thaliana |
AT3G10010:exon:14 | 83 | Chr3: 3083944-3084026 | Arabidopsis thaliana |
AT3G10010:exon:13 | 37 | Chr3: 3084095-3084131 | Arabidopsis thaliana |
AT3G10010:exon:12 | 69 | Chr3: 3084215-3084283 | Arabidopsis thaliana |
AT3G10010:exon:11 | 92 | Chr3: 3084368-3084459 | Arabidopsis thaliana |
AT3G10010:exon:10 | 85 | Chr3: 3084545-3084629 | Arabidopsis thaliana |
AT3G10010:exon:9 | 80 | Chr3: 3084764-3084843 | Arabidopsis thaliana |
AT3G10010:exon:8 | 787 | Chr3: 3084925-3085711 | Arabidopsis thaliana |
AT3G10010:exon:7 | 91 | Chr3: 3085796-3085886 | Arabidopsis thaliana |
AT3G10010:exon:6 | 360 | Chr3: 3086002-3086361 | Arabidopsis thaliana |
AT3G10010:exon:5 | 951 | Chr3: 3086447-3087397 | Arabidopsis thaliana |
AT3G10010:exon:4 | 209 | Chr3: 3087568-3087776 | Arabidopsis thaliana |
AT3G10010:exon:3 | 140 | Chr3: 3088056-3088195 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G10010:five_prime_UTR:2 | 55 | Chr3: 3088196-3088250 | Arabidopsis thaliana |
AT3G10010:five_prime_UTR:1 | 75 | Chr3: 3088476-3088550 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G10010.2 | 4393 | Chr3: 3081735-3088550 |
AT3G10010.1 | 4184 | Chr3: 3081814-3088195 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G10010:three_prime_UTR:2 | 264 | Chr3: 3081735-3081998 | Arabidopsis thaliana |
AT3G10010:three_prime_UTR:1 | 185 | Chr3: 3081814-3081998 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
DML2_ARATH | function | Potential transcriptional activator that may act by nicking the target promoter. Catalyzes the release of 5-methylcytosine (5-meC) from DNA by a glycosylase/lyase mechanism (By similarity). |
DML2_ARATH | similarity | Belongs to the DNA glycosylase family. DEMETER subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
molecular function | |
DNA N-glycosylase activity | ECO |
DNA binding | ECO |
4 iron, 4 sulfur cluster binding | ECO |
DNA demethylase activity | ECO |
metal ion binding | ECO |
biological process | |
chromosomal 5-methylcytosine DNA demethylation pathway | ECO |
base-excision repair | ECO |