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Gene : SIEL A. thaliana

DB identifier  ? AT3G08800 Secondary Identifier  ? locus:2077848
Name  ? SHORT-ROOT interacting embryonic lethal Brief Description  ARM repeat superfamily protein
TAIR Computational Description  ARM repeat superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a nuclear and endosome localized protein with ARM and HEAT domains that interacts with SHR and other non-cell-autonomous proteins and may be involved in their intercellular movement. Hypomorphic mutant phenotypes suggest involvement of the protein in root patterning.
TAIR Short Description  ARM repeat superfamily protein
TAIR Aliases  DSP3, SIEL, SIEL1

2 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4282  
Location: Chr3:2671052-2675333

Gene models - SIEL AT3G08800

? Gene models

Transcripts: 3  Exons: 23  Introns: 20 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SIEL_ARATH function Intracellular shuttle that promotes movement of SHR from the stele into the endodermis (PubMed:21924907). Required for SHR association to endosomes and localization, and for intercellular movement of SHR (PubMed:25124761).
SIEL_ARATH subcellular location Intact microtubules promote the localization to endosomes and the cell cortex.

2 Proteins

Function

Gene Ontology

cellular component
endosome  ? ECO  
nucleus  ? ECO  
cell cortex  ? ECO  
molecular function
No terms in this category.
biological process
intercellular transport  ? ECO  
snRNA 3'-end processing  ? ECO  
root radial pattern formation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets