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Gene : ATG8E A. thaliana

DB identifier  ? AT2G45170 Secondary Identifier  ? locus:2055537
Name  ? AUTOPHAGY 8E Brief Description  AUTOPHAGY 8E
TAIR Computational Description  AUTOPHAGY 8E;(source:Araport11)
TAIR Curator Summary  Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes. Involved in submergence (hypoxia) tolerance; ethanol induces autophagy.
TAIR Short Description  AUTOPHAGY 8E
TAIR Aliases  ATATG8E, ATG8E

4 Gene Rifs

1 Organism

24 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1528  
Location: Chr2:18624264-18625791

Gene models - ATG8E AT2G45170

? Gene models

Transcripts: 2  Exons: 9  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ATG8E_ARATH function Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.
ATG8E_ARATH similarity Belongs to the ATG8 family.
ATG8E_ARATH tissue specificity Constitutively expressed.

1 Proteins

Function

Gene Ontology

cellular component
autophagosome  ? ECO  
autophagosome membrane  ? ECO  
membrane  ? ECO  
cytoplasmic vesicle  ? ECO  
microtubule  ? ECO  
cytoplasm  ? ECO  
molecular function
No terms in this category.
biological process
cellular response to starvation  ? ECO  
protein transport  ? ECO  
response to ethanol  ? ECO  
autophagy  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets