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Gene : APG9 A. thaliana

DB identifier  ? AT2G31260 Secondary Identifier  ? locus:2042531
Name  ? autophagy 9 Brief Description  autophagy 9 (APG9)
TAIR Computational Description  autophagy 9 (APG9);(source:Araport11)
TAIR Curator Summary  Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence. Potential heat-priming associated target of ATAF1.
TAIR Short Description  autophagy 9 (APG9)
TAIR Aliases  APG9, ATAPG9, ATG9

5 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 5664  
Location: Chr2:13321833-13327496 reverse strand

Gene models - APG9 AT2G31260

? Gene models

Transcripts: 1  Exons: 10  Introns: 9 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ATG9_ARATH function Phospholipid scramblase involved in autophagy by mediating autophagosomal membrane expansion (PubMed:12114572, PubMed:24805779). Cycles between the preautophagosomal structure/phagophore assembly site (PAS) and the cytoplasmic vesicle pool and supplies membrane for the growing autophagosome. Lipid scramblase activity plays a key role in preautophagosomal structure/phagophore assembly by distributing the phospholipids that arrive through ATG2 from the cytoplasmic to the luminal leaflet of the bilayer, thereby driving autophagosomal membrane expansion (By similarity). In addition to autophagy, also plays a role in necrotic cell death (By similarity). Plays an essential role in plant nutrient recycling (PubMed:12114572).
ATG9_ARATH similarity Belongs to the ATG9 family.
ATG9_ARATH tissue specificity Expressed in roots, leaves, stems and flowers.

1 Proteins

Function

Gene Ontology

cellular component
phagophore assembly site membrane  ? ECO  
molecular function
No terms in this category.
biological process
lipid transport  ? ECO  
autophagy  ? ECO  
defense response to fungus  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets