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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26310:CDS:1 | 407 | Chr2: 11201770-11202176 | Arabidopsis thaliana |
AT2G26310:CDS:2 | 235 | Chr2: 11202246-11202480 | Arabidopsis thaliana |
AT2G26310:CDS:3 | 76 | Chr2: 11202608-11202683 | Arabidopsis thaliana |
AT2G26310:CDS:4 | 103 | Chr2: 11202769-11202871 | Arabidopsis thaliana |
AT2G26310:CDS:5 | 69 | Chr2: 11203006-11203074 | Arabidopsis thaliana |
AT2G26310:CDS:6 | 37 | Chr2: 11203276-11203312 | Arabidopsis thaliana |
AT2G26310:CDS:8 | 52 | Chr2: 11203563-11203614 | Arabidopsis thaliana |
AT2G26310:CDS:10 | 45 | Chr2: 11203691-11203735 | Arabidopsis thaliana |
AT2G26310:CDS:12 | 98 | Chr2: 11203822-11203919 | Arabidopsis thaliana |
AT2G26310:CDS:1.1 | 407 | Chr2: 11201770-11202176 | Arabidopsis thaliana |
AT2G26310:CDS:2.1 | 235 | Chr2: 11202246-11202480 | Arabidopsis thaliana |
AT2G26310:CDS:3.1 | 76 | Chr2: 11202608-11202683 | Arabidopsis thaliana |
AT2G26310:CDS:4.1 | 103 | Chr2: 11202769-11202871 | Arabidopsis thaliana |
AT2G26310:CDS:5.1 | 69 | Chr2: 11203006-11203074 | Arabidopsis thaliana |
AT2G26310:CDS:6.1 | 37 | Chr2: 11203276-11203312 | Arabidopsis thaliana |
AT2G26310:CDS:7 | 75 | Chr2: 11203402-11203476 | Arabidopsis thaliana |
AT2G26310:CDS:8.1 | 52 | Chr2: 11203563-11203614 | Arabidopsis thaliana |
AT2G26310:CDS:10.1 | 45 | Chr2: 11203691-11203735 | Arabidopsis thaliana |
AT2G26310:CDS:12.1 | 98 | Chr2: 11203822-11203919 | Arabidopsis thaliana |
AT2G26310:CDS:1.2 | 407 | Chr2: 11201770-11202176 | Arabidopsis thaliana |
AT2G26310:CDS:2.2 | 235 | Chr2: 11202246-11202480 | Arabidopsis thaliana |
AT2G26310:CDS:3.2 | 76 | Chr2: 11202608-11202683 | Arabidopsis thaliana |
AT2G26310:CDS:4.2 | 103 | Chr2: 11202769-11202871 | Arabidopsis thaliana |
AT2G26310:CDS:5.2 | 69 | Chr2: 11203006-11203074 | Arabidopsis thaliana |
AT2G26310:CDS:6.2 | 37 | Chr2: 11203276-11203312 | Arabidopsis thaliana |
AT2G26310:CDS:7.1 | 75 | Chr2: 11203402-11203476 | Arabidopsis thaliana |
AT2G26310:CDS:9 | 60 | Chr2: 11203563-11203622 | Arabidopsis thaliana |
AT2G26310:CDS:1.3 | 407 | Chr2: 11201770-11202176 | Arabidopsis thaliana |
AT2G26310:CDS:2.3 | 235 | Chr2: 11202246-11202480 | Arabidopsis thaliana |
AT2G26310:CDS:3.3 | 76 | Chr2: 11202608-11202683 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26310:exon:15 | 328 | Chr2: 11203822-11204149 | Arabidopsis thaliana |
AT2G26310:exon:1 | 181 | Chr2: 11201303-11201483 | Arabidopsis thaliana |
AT2G26310:exon:17 | 349 | Chr2: 11203822-11204170 | Arabidopsis thaliana |
AT2G26310:exon:12 | 128 | Chr2: 11203563-11203690 | Arabidopsis thaliana |
AT2G26310:exon:2 | 164 | Chr2: 11201320-11201483 | Arabidopsis thaliana |
AT2G26310:exon:4 | 447 | Chr2: 11201730-11202176 | Arabidopsis thaliana |
AT2G26310:exon:14 | 463 | Chr2: 11203691-11204153 | Arabidopsis thaliana |
AT2G26310:exon:3 | 495 | Chr2: 11201682-11202176 | Arabidopsis thaliana |
AT2G26310:exon:5 | 235 | Chr2: 11202246-11202480 | Arabidopsis thaliana |
AT2G26310:exon:6 | 76 | Chr2: 11202608-11202683 | Arabidopsis thaliana |
AT2G26310:exon:7 | 103 | Chr2: 11202769-11202871 | Arabidopsis thaliana |
AT2G26310:exon:8 | 69 | Chr2: 11203006-11203074 | Arabidopsis thaliana |
AT2G26310:exon:9 | 37 | Chr2: 11203276-11203312 | Arabidopsis thaliana |
AT2G26310:exon:10 | 75 | Chr2: 11203402-11203476 | Arabidopsis thaliana |
AT2G26310:exon:11 | 52 | Chr2: 11203563-11203614 | Arabidopsis thaliana |
AT2G26310:exon:13 | 45 | Chr2: 11203691-11203735 | Arabidopsis thaliana |
AT2G26310:exon:16 | 332 | Chr2: 11203822-11204153 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26310:five_prime_UTR:1 | 181 | Chr2: 11201303-11201483 | Arabidopsis thaliana |
AT2G26310:five_prime_UTR:2 | 164 | Chr2: 11201320-11201483 | Arabidopsis thaliana |
AT2G26310:five_prime_UTR:4 | 40 | Chr2: 11201730-11201769 | Arabidopsis thaliana |
AT2G26310:five_prime_UTR:3 | 88 | Chr2: 11201682-11201769 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G26310.2 | 1573 | Chr2: 11201303-11204149 |
AT2G26310.1 | 1669 | Chr2: 11201303-11204170 |
AT2G26310.4 | 1334 | Chr2: 11201320-11203690 |
AT2G26310.3 | 1721 | Chr2: 11201320-11204153 |
AT2G26310.5 | 1519 | Chr2: 11201682-11204153 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G26310:three_prime_UTR:3 | 230 | Chr2: 11203920-11204149 | Arabidopsis thaliana |
AT2G26310:three_prime_UTR:5 | 251 | Chr2: 11203920-11204170 | Arabidopsis thaliana |
AT2G26310:three_prime_UTR:1 | 68 | Chr2: 11203623-11203690 | Arabidopsis thaliana |
AT2G26310:three_prime_UTR:2 | 413 | Chr2: 11203741-11204153 | Arabidopsis thaliana |
AT2G26310:three_prime_UTR:4 | 234 | Chr2: 11203920-11204153 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
FAP2_ARATH FAP2_ARATH-3 FAP2_ARATH-4 FAP2_ARATH-2 | function | Fatty-acid-binding protein. Associates with saturated fatty acid. |
FAP2_ARATH FAP2_ARATH-3 FAP2_ARATH-4 FAP2_ARATH-2 A0A1P8B1G4_ARATH A0A2H1ZE28_ARATH | similarity | Belongs to the chalcone isomerase family. |
FAP2_ARATH FAP2_ARATH-3 FAP2_ARATH-4 FAP2_ARATH-2 | tissue specificity | Expressed in developing cotyledons, young seedlings, roots, seeds, embryos, macrospores, preanthesis and tapetum. Restricted to developing and reproductive tissues. |
Function
Gene Ontology
cellular component | |
---|---|
chloroplast stroma | ECO |
molecular function | |
fatty acid binding | ECO |
intramolecular lyase activity | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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