External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs: 49, Exons: 21, Five Prime UTRs: 8, Gene: 1, mRNAs: 8, Three Prime UTRs: 9, Transposable Element: 1, Transposon Fragment: 1
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G06025:CDS:1 | 309 | Chr2: 2350231-2350539 | Arabidopsis thaliana |
AT2G06025:CDS:2 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
AT2G06025:CDS:3 | 37 | Chr2: 2350897-2350933 | Arabidopsis thaliana |
AT2G06025:CDS:4 | 66 | Chr2: 2351030-2351095 | Arabidopsis thaliana |
AT2G06025:CDS:5 | 105 | Chr2: 2351207-2351311 | Arabidopsis thaliana |
AT2G06025:CDS:8 | 162 | Chr2: 2351395-2351556 | Arabidopsis thaliana |
AT2G06025:CDS:1.1 | 309 | Chr2: 2350231-2350539 | Arabidopsis thaliana |
AT2G06025:CDS:2.1 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
AT2G06025:CDS:3.1 | 37 | Chr2: 2350897-2350933 | Arabidopsis thaliana |
AT2G06025:CDS:4.1 | 66 | Chr2: 2351030-2351095 | Arabidopsis thaliana |
AT2G06025:CDS:5.1 | 105 | Chr2: 2351207-2351311 | Arabidopsis thaliana |
AT2G06025:CDS:7 | 154 | Chr2: 2351395-2351548 | Arabidopsis thaliana |
AT2G06025:CDS:10 | 77 | Chr2: 2351672-2351748 | Arabidopsis thaliana |
AT2G06025:CDS:11 | 66 | Chr2: 2351833-2351898 | Arabidopsis thaliana |
AT2G06025:CDS:1.2 | 309 | Chr2: 2350231-2350539 | Arabidopsis thaliana |
AT2G06025:CDS:2.2 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
AT2G06025:CDS:3.2 | 37 | Chr2: 2350897-2350933 | Arabidopsis thaliana |
AT2G06025:CDS:4.2 | 66 | Chr2: 2351030-2351095 | Arabidopsis thaliana |
AT2G06025:CDS:5.2 | 105 | Chr2: 2351207-2351311 | Arabidopsis thaliana |
AT2G06025:CDS:8.1 | 162 | Chr2: 2351395-2351556 | Arabidopsis thaliana |
AT2G06025:CDS:1.3 | 309 | Chr2: 2350231-2350539 | Arabidopsis thaliana |
AT2G06025:CDS:2.3 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
AT2G06025:CDS:3.3 | 37 | Chr2: 2350897-2350933 | Arabidopsis thaliana |
AT2G06025:CDS:4.3 | 66 | Chr2: 2351030-2351095 | Arabidopsis thaliana |
AT2G06025:CDS:5.3 | 105 | Chr2: 2351207-2351311 | Arabidopsis thaliana |
AT2G06025:CDS:7.1 | 154 | Chr2: 2351395-2351548 | Arabidopsis thaliana |
AT2G06025:CDS:10.1 | 77 | Chr2: 2351672-2351748 | Arabidopsis thaliana |
AT2G06025:CDS:11.1 | 66 | Chr2: 2351833-2351898 | Arabidopsis thaliana |
AT2G06025:CDS:1.4 | 309 | Chr2: 2350231-2350539 | Arabidopsis thaliana |
AT2G06025:CDS:2.4 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G06025:exon:1 | 190 | Chr2: 2348059-2348248 | Arabidopsis thaliana |
AT2G06025:exon:20 | 342 | Chr2: 2351833-2352174 | Arabidopsis thaliana |
AT2G06025:exon:2 | 188 | Chr2: 2348061-2348248 | Arabidopsis thaliana |
AT2G06025:exon:6 | 523 | Chr2: 2350017-2350539 | Arabidopsis thaliana |
AT2G06025:exon:15 | 278 | Chr2: 2351395-2351672 | Arabidopsis thaliana |
AT2G06025:exon:3 | 113 | Chr2: 2348136-2348248 | Arabidopsis thaliana |
AT2G06025:exon:4 | 64 | Chr2: 2348914-2348977 | Arabidopsis thaliana |
AT2G06025:exon:5 | 99 | Chr2: 2350017-2350115 | Arabidopsis thaliana |
AT2G06025:exon:8 | 338 | Chr2: 2350202-2350539 | Arabidopsis thaliana |
AT2G06025:exon:18 | 325 | Chr2: 2351833-2352157 | Arabidopsis thaliana |
AT2G06025:exon:13 | 53 | Chr2: 2351395-2351447 | Arabidopsis thaliana |
AT2G06025:exon:14 | 154 | Chr2: 2351395-2351548 | Arabidopsis thaliana |
AT2G06025:exon:17 | 77 | Chr2: 2351672-2351748 | Arabidopsis thaliana |
AT2G06025:exon:7 | 421 | Chr2: 2350119-2350539 | Arabidopsis thaliana |
AT2G06025:exon:9 | 53 | Chr2: 2350622-2350674 | Arabidopsis thaliana |
AT2G06025:exon:10 | 37 | Chr2: 2350897-2350933 | Arabidopsis thaliana |
AT2G06025:exon:11 | 66 | Chr2: 2351030-2351095 | Arabidopsis thaliana |
AT2G06025:exon:12 | 105 | Chr2: 2351207-2351311 | Arabidopsis thaliana |
AT2G06025:exon:16 | 354 | Chr2: 2351395-2351748 | Arabidopsis thaliana |
AT2G06025:exon:19 | 333 | Chr2: 2351833-2352165 | Arabidopsis thaliana |
AT2G06040:exon:6 | 284 | Chr2: 2352145-2352428 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G06025:five_prime_UTR:1 | 190 | Chr2: 2348059-2348248 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:2 | 188 | Chr2: 2348061-2348248 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:6 | 214 | Chr2: 2350017-2350230 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:3 | 113 | Chr2: 2348136-2348248 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:4 | 64 | Chr2: 2348914-2348977 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:5 | 99 | Chr2: 2350017-2350115 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:8 | 29 | Chr2: 2350202-2350230 | Arabidopsis thaliana |
AT2G06025:five_prime_UTR:7 | 112 | Chr2: 2350119-2350230 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT2G06040 | locus:2051542 | AT2G06040 | 3453 | Chr2: 2352145-2355597 | A. thaliana | F-box/LRR protein;(source:Araport11) | Contributes to UV tolerance through nucleotide excision repair. | NULL | RAD7a |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT2G06025.2 | 1734 | Chr2: 2348059-2352174 |
AT2G06025.1 | 1611 | Chr2: 2348059-2352174 |
AT2G06025.3 | 1314 | Chr2: 2348061-2351672 |
AT2G06025.4 | 1431 | Chr2: 2348136-2352157 |
AT2G06025.7 | 1145 | Chr2: 2350119-2352165 |
AT2G06025.6 | 1246 | Chr2: 2350119-2352165 |
AT2G06025.5 | 1369 | Chr2: 2350119-2352165 |
AT2G06040.1 | 2655 | Chr2: 2352145-2355597 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2G06025:three_prime_UTR:5 | 342 | Chr2: 2351833-2352174 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:8 | 276 | Chr2: 2351899-2352174 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:1 | 116 | Chr2: 2351557-2351672 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:6 | 259 | Chr2: 2351899-2352157 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:3 | 70 | Chr2: 2351679-2351748 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:7 | 267 | Chr2: 2351899-2352165 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:2 | 192 | Chr2: 2351557-2351748 | Arabidopsis thaliana |
AT2G06025:three_prime_UTR:4 | 333 | Chr2: 2351833-2352165 | Arabidopsis thaliana |
AT2G06040:three_prime_UTR:1 | 188 | Chr2: 2352145-2352332 | Arabidopsis thaliana |
Transposable Elements
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE10835 | 237 | Chr2: 2349457-2349693 | Arabidopsis thaliana |
Transposon Fragments
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT2TE10835:transposon_fragment:1 | 237 | Chr2: 2349457-2349693 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
GNAT6_ARATH | function | Protein acetyltransferase with dual specificity triggering both N-alpha-acetylation (NTA), with a large spectrum of modified N-termini, including methionine, alanine, serine, threonine and to a lower extent valine as substrates, and epsilon-lysine acetylation (KA). |
GNAT6_ARATH | similarity | Belongs to the acetyltransferase family. GNAT subfamily. |
GNAT6_ARATH | subcellular location | Spotted pattern, either associated with chloroplasts or confined within the nuclear envelope. |
GNAT6_ARATH | tissue specificity | Expressed in green tissues and in roots. |
Function
Gene Ontology
cellular component | |
---|---|
perinuclear region of cytoplasm | ECO |
chloroplast | ECO |
molecular function | |
N-acetyltransferase activity | ECO |
biological process | |
peptidyl-lysine acetylation | ECO |
N-terminal protein amino acid acetylation | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...