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Gene : CKX5 A. thaliana

DB identifier  ? AT1G75450 Secondary Identifier  ? locus:2018437
Name  ? cytokinin oxidase 5 Brief Description  cytokinin oxidase 5
TAIR Computational Description  cytokinin oxidase 5;(source:Araport11)
TAIR Curator Summary  This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
TAIR Short Description  cytokinin oxidase 5
TAIR Aliases  ATCKX5, ATCKX6, CKX5

2 Gene Rifs

1 Organism

23 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3918  
Location: Chr1:28314458-28318375 reverse strand

Gene models - CKX5 AT1G75450

? Gene models

Transcripts: 2  Exons: 10  Introns: 8 

Overlapping Features

? Genome features that overlap coordinates of this Gene

10 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CKX5_ARATH developmental stage Expressed in young developing stamen primordia and later confined to the central part of growing anthers. Before and during pollination, restricted to the maturing pollen grains.
CKX5_ARATH function Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group (By similarity). In association with CKX3 regulates the activity of the reproductive meristems, flower organ size and ovule formation (PubMed:21224426).
CKX5_ARATH F4HZ40_ARATH similarity Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
CKX5_ARATH tissue specificity Expressed in the developing leaf petioles and in the rib zone of the axillary shoot meristems. In roots, expressed in the vascular cylinder within the root apical meristem and only faintly detectable in the differentiated root.

2 Proteins

Function

Gene Ontology

cellular component
extracellular region  ? ECO  
molecular function
cytokinin dehydrogenase activity  ? ECO  
FAD binding  ? ECO  
biological process
cytokinin catabolic process  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets