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Gene : AT1G73980 A. thaliana

DB identifier  ? AT1G73980 Secondary Identifier  ? locus:2031541
Brief Description  Phosphoribulokinase / Uridine kinase family
TAIR Computational Description  Phosphoribulokinase / Uridine kinase family;(source:Araport11)
TAIR Curator Summary  TTM1 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity. It contains both a uridine kinase (UK) domain,CYTH domain, a coiled-coil domain and a transmembrane domain at the C-terminal Mutants show a delay in leaf senescence. Can functionally complement TTM1 and vise versa. (PMID:28733390)
TAIR Short Description  Phosphoribulokinase / Uridine kinase family
TAIR Aliases  AtTTM1, TTM1

2 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4068  
Location: Chr1:27820060-27824127 reverse strand

Gene models - AT1G73980 AT1G73980

? Gene models

Transcripts: 3  Exons: 37  Introns: 34 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TTM1_ARATH function Exhibits pyrophosphatase activity with stronger affinity for pyrophosphate (PPi), moderate affinity for ATP and ADP, and weak affinity for tripolyphosphate (PPPi). No activity observed toward uridine substrate. Positively regulates natural and dark-induced leaf senescence.
TTM1_ARATH tissue specificity Ubiquitously expressed in all tissues, with strong expression detected in senescent leaves.

1 Proteins

Function

Gene Ontology

cellular component
mitochondrial outer membrane  ? ECO  
molecular function
ATP binding  ? ECO  
inorganic diphosphate phosphatase activity  ? ECO  
pyrophosphatase activity  ? ECO  
kinase activity  ? ECO  
biological process
defense response  ? ECO  
regulation of leaf senescence  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets