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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73980:CDS:11 | 219 | Chr1: 27820292-27820510 | Arabidopsis thaliana |
AT1G73980:CDS:10 | 222 | Chr1: 27820723-27820944 | Arabidopsis thaliana |
AT1G73980:CDS:9 | 124 | Chr1: 27821054-27821177 | Arabidopsis thaliana |
AT1G73980:CDS:8 | 113 | Chr1: 27821296-27821408 | Arabidopsis thaliana |
AT1G73980:CDS:7 | 123 | Chr1: 27821498-27821620 | Arabidopsis thaliana |
AT1G73980:CDS:6 | 195 | Chr1: 27821719-27821913 | Arabidopsis thaliana |
AT1G73980:CDS:5 | 174 | Chr1: 27822027-27822200 | Arabidopsis thaliana |
AT1G73980:CDS:4 | 114 | Chr1: 27822315-27822428 | Arabidopsis thaliana |
AT1G73980:CDS:3 | 196 | Chr1: 27822613-27822808 | Arabidopsis thaliana |
AT1G73980:CDS:2 | 115 | Chr1: 27822954-27823068 | Arabidopsis thaliana |
AT1G73980:CDS:1 | 337 | Chr1: 27823191-27823527 | Arabidopsis thaliana |
AT1G73980:CDS:11.1 | 219 | Chr1: 27820292-27820510 | Arabidopsis thaliana |
AT1G73980:CDS:10.1 | 222 | Chr1: 27820723-27820944 | Arabidopsis thaliana |
AT1G73980:CDS:9.1 | 124 | Chr1: 27821054-27821177 | Arabidopsis thaliana |
AT1G73980:CDS:8.1 | 113 | Chr1: 27821296-27821408 | Arabidopsis thaliana |
AT1G73980:CDS:7.1 | 123 | Chr1: 27821498-27821620 | Arabidopsis thaliana |
AT1G73980:CDS:6.1 | 195 | Chr1: 27821719-27821913 | Arabidopsis thaliana |
AT1G73980:CDS:5.1 | 174 | Chr1: 27822027-27822200 | Arabidopsis thaliana |
AT1G73980:CDS:4.1 | 114 | Chr1: 27822315-27822428 | Arabidopsis thaliana |
AT1G73980:CDS:3.1 | 196 | Chr1: 27822613-27822808 | Arabidopsis thaliana |
AT1G73980:CDS:2.1 | 115 | Chr1: 27822954-27823068 | Arabidopsis thaliana |
AT1G73980:CDS:1.1 | 337 | Chr1: 27823191-27823527 | Arabidopsis thaliana |
AT1G73980:CDS:11.2 | 219 | Chr1: 27820292-27820510 | Arabidopsis thaliana |
AT1G73980:CDS:10.2 | 222 | Chr1: 27820723-27820944 | Arabidopsis thaliana |
AT1G73980:CDS:9.2 | 124 | Chr1: 27821054-27821177 | Arabidopsis thaliana |
AT1G73980:CDS:8.2 | 113 | Chr1: 27821296-27821408 | Arabidopsis thaliana |
AT1G73980:CDS:7.2 | 123 | Chr1: 27821498-27821620 | Arabidopsis thaliana |
AT1G73980:CDS:6.2 | 195 | Chr1: 27821719-27821913 | Arabidopsis thaliana |
AT1G73980:CDS:5.2 | 174 | Chr1: 27822027-27822200 | Arabidopsis thaliana |
AT1G73980:CDS:4.2 | 114 | Chr1: 27822315-27822428 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:exon:11 | 447 | Chr1: 27819724-27820170 | Arabidopsis thaliana |
AT1G73970:exon:9 | 684 | Chr1: 27819395-27820078 | Arabidopsis thaliana |
AT1G73970:exon:10 | 355 | Chr1: 27819724-27820078 | Arabidopsis thaliana |
AT1G73980:exon:2 | 246 | Chr1: 27823657-27823902 | Arabidopsis thaliana |
AT1G73980:exon:3 | 173 | Chr1: 27823657-27823829 | Arabidopsis thaliana |
AT1G73980:exon:14 | 451 | Chr1: 27820060-27820510 | Arabidopsis thaliana |
AT1G73980:exon:13 | 222 | Chr1: 27820723-27820944 | Arabidopsis thaliana |
AT1G73980:exon:12 | 124 | Chr1: 27821054-27821177 | Arabidopsis thaliana |
AT1G73980:exon:11 | 113 | Chr1: 27821296-27821408 | Arabidopsis thaliana |
AT1G73980:exon:10 | 123 | Chr1: 27821498-27821620 | Arabidopsis thaliana |
AT1G73980:exon:9 | 195 | Chr1: 27821719-27821913 | Arabidopsis thaliana |
AT1G73980:exon:8 | 174 | Chr1: 27822027-27822200 | Arabidopsis thaliana |
AT1G73980:exon:7 | 114 | Chr1: 27822315-27822428 | Arabidopsis thaliana |
AT1G73980:exon:6 | 196 | Chr1: 27822613-27822808 | Arabidopsis thaliana |
AT1G73980:exon:5 | 115 | Chr1: 27822954-27823068 | Arabidopsis thaliana |
AT1G73980:exon:4 | 374 | Chr1: 27823191-27823564 | Arabidopsis thaliana |
AT1G73980:exon:1 | 190 | Chr1: 27823938-27824127 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73980:five_prime_UTR:2 | 246 | Chr1: 27823657-27823902 | Arabidopsis thaliana |
AT1G73980:five_prime_UTR:3 | 173 | Chr1: 27823657-27823829 | Arabidopsis thaliana |
AT1G73980:five_prime_UTR:4 | 37 | Chr1: 27823528-27823564 | Arabidopsis thaliana |
AT1G73980:five_prime_UTR:1 | 190 | Chr1: 27823938-27824127 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G73970 | locus:2031556 | AT1G73970 | 3393 | Chr1: 27816778-27820170 | A. thaliana | obscurin-like protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G73970.1 | 2981 | Chr1: 27816778-27820170 |
AT1G73970.2 | 2997 | Chr1: 27816780-27820078 |
AT1G73970.3 | 2983 | Chr1: 27816780-27820078 |
AT1G73970.4 | 2802 | Chr1: 27816798-27820078 |
AT1G73980.3 | 2447 | Chr1: 27820060-27823902 |
AT1G73980.2 | 2564 | Chr1: 27820060-27824127 |
AT1G73980.1 | 2391 | Chr1: 27820060-27824127 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G73970:three_prime_UTR:6 | 207 | Chr1: 27819964-27820170 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:4 | 336 | Chr1: 27819743-27820078 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:3 | 355 | Chr1: 27819724-27820078 | Arabidopsis thaliana |
AT1G73970:three_prime_UTR:5 | 115 | Chr1: 27819964-27820078 | Arabidopsis thaliana |
AT1G73980:three_prime_UTR:1 | 232 | Chr1: 27820060-27820291 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
TTM1_ARATH | function | Exhibits pyrophosphatase activity with stronger affinity for pyrophosphate (PPi), moderate affinity for ATP and ADP, and weak affinity for tripolyphosphate (PPPi). No activity observed toward uridine substrate. Positively regulates natural and dark-induced leaf senescence. |
TTM1_ARATH | tissue specificity | Ubiquitously expressed in all tissues, with strong expression detected in senescent leaves. |
Function
Gene Ontology
cellular component | |
---|---|
mitochondrial outer membrane | ECO |
molecular function | |
ATP binding | ECO |
inorganic diphosphate phosphatase activity | ECO |
pyrophosphatase activity | ECO |
kinase activity | ECO |
biological process | |
defense response | ECO |
regulation of leaf senescence | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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