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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61490:CDS:10 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:CDS:9 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
AT1G61490:CDS:8 | 238 | Chr1: 22685800-22686037 | Arabidopsis thaliana |
AT1G61490:CDS:7 | 211 | Chr1: 22686126-22686336 | Arabidopsis thaliana |
AT1G61490:CDS:6 | 152 | Chr1: 22686415-22686566 | Arabidopsis thaliana |
AT1G61490:CDS:5 | 111 | Chr1: 22686778-22686888 | Arabidopsis thaliana |
AT1G61490:CDS:2 | 1255 | Chr1: 22687013-22688267 | Arabidopsis thaliana |
AT1G61490:CDS:10.1 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:CDS:9.1 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
AT1G61490:CDS:8.1 | 238 | Chr1: 22685800-22686037 | Arabidopsis thaliana |
AT1G61490:CDS:7.1 | 211 | Chr1: 22686126-22686336 | Arabidopsis thaliana |
AT1G61490:CDS:6.1 | 152 | Chr1: 22686415-22686566 | Arabidopsis thaliana |
AT1G61490:CDS:5.1 | 111 | Chr1: 22686778-22686888 | Arabidopsis thaliana |
AT1G61490:CDS:2.1 | 1255 | Chr1: 22687013-22688267 | Arabidopsis thaliana |
AT1G61490:CDS:10.2 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:CDS:9.2 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
AT1G61490:CDS:8.2 | 238 | Chr1: 22685800-22686037 | Arabidopsis thaliana |
AT1G61490:CDS:7.2 | 211 | Chr1: 22686126-22686336 | Arabidopsis thaliana |
AT1G61490:CDS:6.2 | 152 | Chr1: 22686415-22686566 | Arabidopsis thaliana |
AT1G61490:CDS:5.2 | 111 | Chr1: 22686778-22686888 | Arabidopsis thaliana |
AT1G61490:CDS:3 | 805 | Chr1: 22687013-22687817 | Arabidopsis thaliana |
AT1G61490:CDS:10.3 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:CDS:9.3 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
AT1G61490:CDS:8.3 | 238 | Chr1: 22685800-22686037 | Arabidopsis thaliana |
AT1G61490:CDS:7.3 | 211 | Chr1: 22686126-22686336 | Arabidopsis thaliana |
AT1G61490:CDS:6.3 | 152 | Chr1: 22686415-22686566 | Arabidopsis thaliana |
AT1G61490:CDS:5.3 | 111 | Chr1: 22686778-22686888 | Arabidopsis thaliana |
AT1G61490:CDS:2.2 | 1255 | Chr1: 22687013-22688267 | Arabidopsis thaliana |
AT1G61490:CDS:10.4 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:CDS:9.4 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61490:exon:21 | 557 | Chr1: 22684894-22685450 | Arabidopsis thaliana |
AT1G61490:exon:10 | 1255 | Chr1: 22687013-22688267 | Arabidopsis thaliana |
AT1G61490:exon:8 | 1547 | Chr1: 22687013-22688559 | Arabidopsis thaliana |
AT1G61490:exon:20 | 380 | Chr1: 22685071-22685450 | Arabidopsis thaliana |
AT1G61490:exon:11 | 1190 | Chr1: 22687013-22688202 | Arabidopsis thaliana |
AT1G61490:exon:4 | 189 | Chr1: 22688371-22688559 | Arabidopsis thaliana |
AT1G61490:exon:2 | 131 | Chr1: 22688879-22689009 | Arabidopsis thaliana |
AT1G61490:exon:9 | 1411 | Chr1: 22687013-22688423 | Arabidopsis thaliana |
AT1G61490:exon:3 | 607 | Chr1: 22688498-22689104 | Arabidopsis thaliana |
AT1G61490:exon:7 | 2092 | Chr1: 22687013-22689104 | Arabidopsis thaliana |
AT1G61490:exon:19 | 320 | Chr1: 22685131-22685450 | Arabidopsis thaliana |
AT1G61490:exon:5 | 1547 | Chr1: 22687558-22689104 | Arabidopsis thaliana |
AT1G61490:exon:1 | 384 | Chr1: 22689228-22689611 | Arabidopsis thaliana |
AT1G61490:exon:18 | 297 | Chr1: 22685154-22685450 | Arabidopsis thaliana |
AT1G61490:exon:17 | 151 | Chr1: 22685552-22685702 | Arabidopsis thaliana |
AT1G61490:exon:16 | 238 | Chr1: 22685800-22686037 | Arabidopsis thaliana |
AT1G61490:exon:15 | 211 | Chr1: 22686126-22686336 | Arabidopsis thaliana |
AT1G61490:exon:14 | 152 | Chr1: 22686415-22686566 | Arabidopsis thaliana |
AT1G61490:exon:13 | 111 | Chr1: 22686778-22686888 | Arabidopsis thaliana |
AT1G61490:exon:12 | 467 | Chr1: 22687013-22687479 | Arabidopsis thaliana |
AT1G61490:exon:6 | 710 | Chr1: 22687558-22688267 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61490:five_prime_UTR:6 | 292 | Chr1: 22688268-22688559 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:8 | 385 | Chr1: 22687818-22688202 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:4 | 189 | Chr1: 22688371-22688559 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:2 | 131 | Chr1: 22688879-22689009 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:7 | 156 | Chr1: 22688268-22688423 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:3 | 607 | Chr1: 22688498-22689104 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:5 | 837 | Chr1: 22688268-22689104 | Arabidopsis thaliana |
AT1G61490:five_prime_UTR:1 | 384 | Chr1: 22689228-22689611 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G61490.1 | 2675 | Chr1: 22684894-22688267 |
AT1G61490.2 | 2921 | Chr1: 22685071-22689009 |
AT1G61490.3 | 2753 | Chr1: 22685071-22689009 |
AT1G61490.5 | 3585 | Chr1: 22685131-22689611 |
AT1G61490.4 | 3659 | Chr1: 22685131-22689611 |
AT1G61490.6 | 3581 | Chr1: 22685131-22689611 |
AT1G61490.7 | 2337 | Chr1: 22685154-22688267 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G61490:three_prime_UTR:3 | 260 | Chr1: 22684894-22685153 | Arabidopsis thaliana |
AT1G61490:three_prime_UTR:2 | 83 | Chr1: 22685071-22685153 | Arabidopsis thaliana |
AT1G61490:three_prime_UTR:1 | 23 | Chr1: 22685131-22685153 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
Y1649_ARATH A0A1P8AVJ2_ARATH | similarity | Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. |
Function
Gene Ontology
cellular component | |
---|---|
plasma membrane | ECO |
molecular function | |
ATP binding | ECO |
calmodulin binding | ECO |
histone H2AS1 kinase activity | ECO |
protein serine kinase activity | ECO |
ubiquitin protein ligase binding | ECO |
protein serine/threonine kinase activity | ECO |
carbohydrate binding | ECO |
biological process | |
protein phosphorylation | ECO |
recognition of pollen | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...