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Gene : ECT4 A. thaliana

DB identifier  ? AT1G55500 Secondary Identifier  ? locus:2193909
Name  ? evolutionarily conserved C-terminal region 4 Brief Description  evolutionarily conserved C-terminal region 4
TAIR Computational Description  evolutionarily conserved C-terminal region 4;(source:Araport11)
TAIR Curator Summary  YTHDF protein which togeteher with ECT2 and ECT3 is involved in cell proliferation during plant organogenesis.
TAIR Short Description  evolutionarily conserved C-terminal region 4
TAIR Aliases  ECT4

2 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3384  
Location: Chr1:20719473-20722856

Gene models - ECT4 AT1G55500

? Gene models

Transcripts: 6  Exons: 51  Introns: 45 

Overlapping Features

? Genome features that overlap coordinates of this Gene

22 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
A0A1P8AS28_ARATH A0A1P8AS00_ARATH F4I0C2_ARATH F4I0C1_ARATH function Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.
ECT4_ARATH-2 ECT4_ARATH function Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability (Probable). M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing (Probable). Required for the correct timing of leaf formation and normal leaf morphology (PubMed:29643069).
A0A1P8AS28_ARATH A0A1P8AS00_ARATH F4I0C2_ARATH F4I0C1_ARATH similarity Belongs to the YTHDF family.
ECT4_ARATH-2 ECT4_ARATH subcellular location Localizes to cytoplasmic foci upon drought stress.
ECT4_ARATH-2 ECT4_ARATH tissue specificity Expressed in the shoot apex, at the sites of leaf formation, and in emerging leaves.

6 Proteins

Function

Gene Ontology

cellular component
cytoplasm  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
mRNA destabilization  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets