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Gene : CPN60B A. thaliana

DB identifier  ? AT1G55490 Secondary Identifier  ? locus:2193839
Name  ? chaperonin 60 beta Brief Description  chaperonin 60 beta
TAIR Computational Description  chaperonin 60 beta;(source:Araport11)
TAIR Curator Summary  encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.
TAIR Short Description  chaperonin 60 beta
TAIR Aliases  CPN60B, Cpn60beta1, CPNB1, LEN1

1 Gene Rifs

1 Organism

56 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3699  
Location: Chr1:20715563-20719261 reverse strand

Gene models - CPN60B AT1G55490

? Gene models

Transcripts: 5  Exons: 75  Introns: 70 

Overlapping Features

? Genome features that overlap coordinates of this Gene

25 Child Features

1 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
CPNB1_ARATH function Binds RuBisCO small and large subunits and is implicated in the assembly of the enzyme oligomer. Involved in protein assisted folding. Required for proper plastid division.
CPNB1_ARATH similarity Belongs to the chaperonin (HSP60) family.
CPNB1_ARATH tissue specificity Expressed in leaves, stems, petioles and flowers.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast envelope  ? ECO  
chloroplast stroma  ? ECO  
nucleus  ? ECO  
cytosolic ribosome  ? ECO  
stromule  ? ECO  
apoplast  ? ECO  
chloroplast  ? ECO  
molecular function
ATP binding  ? ECO  
mRNA binding  ? ECO  
ATP-dependent protein folding chaperone  ? ECO  
protein domain specific binding  ? ECO  
biological process
chaperone cofactor-dependent protein refolding  ? ECO  
cell death  ? ECO  
response to cold  ? ECO  
protein refolding  ? ECO  
systemic acquired resistance  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets