help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : WIP5 A. thaliana

DB identifier  ? AT1G51220 Secondary Identifier  ? locus:2008281
Name  ? WIP domain protein 5 Brief Description  WIP domain protein 5
TAIR Computational Description  WIP domain protein 5;(source:Araport11)
TAIR Curator Summary  Encodes a WIP domain containing protein. Putative target of WRKY53.WIP5 is a paralog of NTT and along with WIP4,acts redundantly in cell fate determination during primary root development. MP binds to AuxRE motifs within the WIP5 gene and likely regulates its expression.
TAIR Short Description  WIP domain protein 5
TAIR Aliases  AtWIP5, WIP5

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2399  
Location: Chr1:18989751-18992149 reverse strand

Gene models - WIP5 AT1G51220

? Gene models

Transcripts: 1  Exons: 2  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

3 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ZWIP5_ARATH function Probable transcriptional regulator.
ZWIP5_ARATH similarity Belongs to the WIP C2H2-type zinc-finger protein family.

1 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
molecular function
DNA-binding transcription factor activity  ? ECO  
metal ion binding  ? ECO  
biological process
regulation of DNA-templated transcription  ? ECO  
primary root development  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets