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Gene : SAMBA A. thaliana

DB identifier  ? AT1G32310 Secondary Identifier  ? locus:2028296
Name  ? SAMBA Brief Description  valine-tRNA ligase
TAIR Computational Description  valine-tRNA ligase;(source:Araport11)
TAIR Curator Summary  Encodes a plant-specific negative regulator of the APC/C complex. It is expressed during embryogenesis and early plant development and plays a key role in organ size control. Mutants are defective in mitosis I of pollen development, resulting in pollen without sperm nuclei.
TAIR Short Description  NULL
TAIR Aliases  SAMBA

1 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1334  
Location: Chr1:11653500-11654833

Gene models - SAMBA AT1G32310

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
SAMBA_ARATH function Plays an important role in organ size control. Acts as negative regulator of the anaphase-promoting complex/cyclosome (APC/C). Regulates cell proliferation during early development by targeting CYCA2-3 for APC/C-mediated degradation. Required for mitosis I during pollen microspore development.
SAMBA_ARATH tissue specificity Expressed in embryos, germinating seeds, hypocotyls and pollen grains.

1 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
anaphase-promoting complex binding  ? ECO  
biological process
pollen development  ? ECO  
positive regulation of protein catabolic process  ? ECO  
negative regulation of organ growth  ? ECO  
microsporogenesis  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets