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Gene : LOX3 A. thaliana

DB identifier  ? AT1G17420 Secondary Identifier  ? locus:2018848
Name  ? lipoxygenase 3 Brief Description  lipoxygenase 3
TAIR Computational Description  lipoxygenase 3;(source:Araport11)
TAIR Curator Summary  LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).
TAIR Short Description  lipoxygenase 3
TAIR Aliases  ATLOX3, LOX3

4 Gene Rifs

1 Organism

55 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4199  
Location: Chr1:5977323-5981521

Gene models - LOX3 AT1G17420

? Gene models

Transcripts: 1  Exons: 8  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
LOX3_ARATH developmental stage First observed in lateral root primordia (LRP), from the first pericycle divisions. Later expressed in lateral roots. Expression is greatly increased in leaves during leaf senescence.
LOX3_ARATH function 13S-lipoxygenase that can use linolenic acid as substrates. Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity).
LOX3_ARATH pathway Lipid metabolism; oxylipin biosynthesis.
LOX3_ARATH similarity Belongs to the lipoxygenase family.
LOX3_ARATH tissue specificity Expressed in roots and leaves.

1 Proteins

Function

Gene Ontology

cellular component
chloroplast  ? ECO  
molecular function
linoleate 13S-lipoxygenase activity  ? ECO  
metal ion binding  ? ECO  
biological process
response to fungus  ? ECO  
anther dehiscence  ? ECO  
fatty acid biosynthetic process  ? ECO  
pollen development  ? ECO  
anther development  ? ECO  
lipid oxidation  ? ECO  
response to wounding  ? ECO  
response to high light intensity  ? ECO  
oxylipin biosynthetic process  ? ECO  
response to jasmonic acid  ? ECO  
stamen filament development  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets