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Gene : AT1G13030 A. thaliana

DB identifier  ? AT1G13030 Secondary Identifier  ? locus:2031810
Brief Description  sphere organelles protein-like protein
TAIR Computational Description  sphere organelles protein-like protein;(source:Araport11)
TAIR Curator Summary  Encodes a plant coilin, a protein that in other organisms is a major structural scaffolding protein necessary for Cajal body formation, composition and activity. It has been shown to bind both U1 and U1 snRNAs in vitro.
TAIR Short Description  sphere organelles protein-related
TAIR Aliases  Atcoilin, COILIN

5 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3370  
Location: Chr1:4444043-4447412 reverse strand

Gene models - AT1G13030 AT1G13030

? Gene models

Transcripts: 1  Exons: 13  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

14 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
COIL_ARATH function Probable component of nuclear coiled bodies, also known as Cajal bodies or CBs, which are involved in the modification and assembly of nucleoplasmic snRNPs (Probable). Required for CBs formation (PubMed:16624863). Binds snRNAs and non-specific artificial RNA via the N-terminal part of the NOD domain and via the NLS2 region (212-282) of the IDD domain (PubMed:23320094). The two sites are able to function independently and provide effective RNA-binding in a non-cooperative manner (PubMed:23320094).
COIL_ARATH similarity Belongs to the coilin family.

1 Proteins

Function

Gene Ontology

cellular component
Cajal body  ? ECO  
molecular function
U2 snRNA binding  ? ECO  
U1 snRNA binding  ? ECO  
biological process
RNA processing  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets