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Gene : AT1G11160 A. thaliana

DB identifier  ? AT1G11160 Secondary Identifier  ? locus:2202129
Brief Description  Transducin/WD40 repeat-like superfamily protein
TAIR Computational Description  Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
TAIR Curator Summary  One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules.
TAIR Short Description  Transducin/WD40 repeat-like superfamily protein
TAIR Aliases  KTN80.1

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 6801  
Location: Chr1:3733044-3739844

Gene models - AT1G11160 AT1G11160

? Gene models

Transcripts: 4  Exons: 74  Introns: 70 

Overlapping Features

? Genome features that overlap coordinates of this Gene

28 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
KTN81_ARATH function May participate in a complex which severs microtubules in an ATP-dependent manner (By similarity). Microtubule severing may promote rapid reorganization of cellular microtubule arrays (By similarity). Confers precision to microtubule (MT) severing by specific targeting of KTN1 to MT cleavage sites such as crossover or branching nucleation sites (PubMed:28978669). Together with other KTN80s, regulates cell elongation by modulating MT organization (PubMed:28978669).
F4I7E1_ARATH A0A1P8AW58_ARATH A0A1P8AW68_ARATH function May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
KTN81_ARATH F4I7E1_ARATH A0A1P8AW58_ARATH A0A1P8AW68_ARATH similarity Belongs to the WD repeat KATNB1 family.
KTN81_ARATH subcellular location Present in dynamic discrete particles specifically localized to microtubule (MT) crossovers and branching nucleation sites.
KTN81_ARATH tissue specificity Expressed at low levels in siliques, flowers, leaves, stems and roots.

4 Proteins

Function

Gene Ontology

cellular component
microtubule cytoskeleton  ? ECO  
microtubule  ? ECO  
cytoplasm  ? ECO  
katanin complex  ? ECO  
molecular function
microtubule binding  ? ECO  
biological process
microtubule severing  ? ECO  
microtubule depolymerization  ? ECO  
regulation of unidimensional cell growth  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets