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Gene : OTP82 A. thaliana

DB identifier  ? AT1G08070 Secondary Identifier  ? locus:2205200
Name  ? ORGANELLE TRANSCRIPT PROCESSING 82 Brief Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Computational Description  Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary  Encodes a chloroplast RNA editing factor.
TAIR Short Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases  EMB3102, OTP82

3 Gene Rifs

1 Organism

12 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2471  
Location: Chr1:2514150-2516620 reverse strand

Gene models - OTP82 AT1G08070

? Gene models

Transcripts: 2  Exons: 3  Introns: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PPR21_ARATH function Involved in multiple sites RNA editing events in chloroplasts. Involved in the editing of the site 9 of ndhB (ndhB-9) and site 1 of ndhG (ndhG-1) transcripts, which are two plastid-encoded subunits of the chloroplast NAD(P)H dehydrogenase (NDH) complex. Not essential for the activity of the NDH complex of the photosynthetic electron transport chain.
A0A1P8ARF0_ARATH PPR21_ARATH similarity Belongs to the PPR family. PCMP-H subfamily.

2 Proteins

Function

Gene Ontology

cellular component
chloroplast  ? ECO  
molecular function
zinc ion binding  ? ECO  
RNA binding  ? ECO  
biological process
mRNA processing  ? ECO  
chloroplast RNA processing  ? ECO  
RNA modification  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets