Lists
This Gene is in one list:
External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01950:CDS:1 | 169 | Chr1: 325473-325641 | Arabidopsis thaliana |
AT1G01950:CDS:2 | 101 | Chr1: 325913-326013 | Arabidopsis thaliana |
AT1G01950:CDS:3 | 123 | Chr1: 326106-326228 | Arabidopsis thaliana |
AT1G01950:CDS:4 | 186 | Chr1: 326332-326517 | Arabidopsis thaliana |
AT1G01950:CDS:6 | 222 | Chr1: 326594-326815 | Arabidopsis thaliana |
AT1G01950:CDS:7 | 154 | Chr1: 326931-327084 | Arabidopsis thaliana |
AT1G01950:CDS:8 | 150 | Chr1: 327237-327386 | Arabidopsis thaliana |
AT1G01950:CDS:9 | 89 | Chr1: 327488-327576 | Arabidopsis thaliana |
AT1G01950:CDS:10 | 204 | Chr1: 327663-327866 | Arabidopsis thaliana |
AT1G01950:CDS:11 | 108 | Chr1: 328000-328107 | Arabidopsis thaliana |
AT1G01950:CDS:12 | 135 | Chr1: 328188-328322 | Arabidopsis thaliana |
AT1G01950:CDS:14 | 132 | Chr1: 328424-328555 | Arabidopsis thaliana |
AT1G01950:CDS:17 | 133 | Chr1: 328898-329030 | Arabidopsis thaliana |
AT1G01950:CDS:18 | 93 | Chr1: 329119-329211 | Arabidopsis thaliana |
AT1G01950:CDS:19 | 126 | Chr1: 329311-329436 | Arabidopsis thaliana |
AT1G01950:CDS:20 | 126 | Chr1: 329573-329698 | Arabidopsis thaliana |
AT1G01950:CDS:21 | 144 | Chr1: 329781-329924 | Arabidopsis thaliana |
AT1G01950:CDS:22 | 129 | Chr1: 330027-330155 | Arabidopsis thaliana |
AT1G01950:CDS:23 | 161 | Chr1: 330243-330403 | Arabidopsis thaliana |
AT1G01950:CDS:5 | 156 | Chr1: 326362-326517 | Arabidopsis thaliana |
AT1G01950:CDS:6.1 | 222 | Chr1: 326594-326815 | Arabidopsis thaliana |
AT1G01950:CDS:7.1 | 154 | Chr1: 326931-327084 | Arabidopsis thaliana |
AT1G01950:CDS:8.1 | 150 | Chr1: 327237-327386 | Arabidopsis thaliana |
AT1G01950:CDS:9.1 | 89 | Chr1: 327488-327576 | Arabidopsis thaliana |
AT1G01950:CDS:10.1 | 204 | Chr1: 327663-327866 | Arabidopsis thaliana |
AT1G01950:CDS:11.1 | 108 | Chr1: 328000-328107 | Arabidopsis thaliana |
AT1G01950:CDS:12.1 | 135 | Chr1: 328188-328322 | Arabidopsis thaliana |
AT1G01950:CDS:14.1 | 132 | Chr1: 328424-328555 | Arabidopsis thaliana |
AT1G01950:CDS:17.1 | 133 | Chr1: 328898-329030 | Arabidopsis thaliana |
AT1G01950:CDS:18.1 | 93 | Chr1: 329119-329211 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01950:exon:1 | 326 | Chr1: 325316-325641 | Arabidopsis thaliana |
AT1G01950:exon:2 | 313 | Chr1: 325329-325641 | Arabidopsis thaliana |
AT1G01950:exon:5 | 316 | Chr1: 325913-326228 | Arabidopsis thaliana |
AT1G01950:exon:25 | 161 | Chr1: 330243-330403 | Arabidopsis thaliana |
AT1G01950:exon:16 | 132 | Chr1: 328424-328555 | Arabidopsis thaliana |
AT1G01950:exon:17 | 49 | Chr1: 328686-328734 | Arabidopsis thaliana |
AT1G01950:exon:18 | 147 | Chr1: 328884-329030 | Arabidopsis thaliana |
AT1G01950:exon:3 | 263 | Chr1: 325379-325641 | Arabidopsis thaliana |
AT1G01950:exon:4 | 101 | Chr1: 325913-326013 | Arabidopsis thaliana |
AT1G01950:exon:6 | 123 | Chr1: 326106-326228 | Arabidopsis thaliana |
AT1G01950:exon:7 | 186 | Chr1: 326332-326517 | Arabidopsis thaliana |
AT1G01950:exon:8 | 222 | Chr1: 326594-326815 | Arabidopsis thaliana |
AT1G01950:exon:9 | 154 | Chr1: 326931-327084 | Arabidopsis thaliana |
AT1G01950:exon:10 | 150 | Chr1: 327237-327386 | Arabidopsis thaliana |
AT1G01950:exon:11 | 89 | Chr1: 327488-327576 | Arabidopsis thaliana |
AT1G01950:exon:12 | 204 | Chr1: 327663-327866 | Arabidopsis thaliana |
AT1G01950:exon:13 | 108 | Chr1: 328000-328107 | Arabidopsis thaliana |
AT1G01950:exon:14 | 135 | Chr1: 328188-328322 | Arabidopsis thaliana |
AT1G01950:exon:15 | 81 | Chr1: 328424-328504 | Arabidopsis thaliana |
AT1G01950:exon:19 | 133 | Chr1: 328898-329030 | Arabidopsis thaliana |
AT1G01950:exon:20 | 93 | Chr1: 329119-329211 | Arabidopsis thaliana |
AT1G01950:exon:21 | 126 | Chr1: 329311-329436 | Arabidopsis thaliana |
AT1G01950:exon:22 | 126 | Chr1: 329573-329698 | Arabidopsis thaliana |
AT1G01950:exon:23 | 144 | Chr1: 329781-329924 | Arabidopsis thaliana |
AT1G01950:exon:24 | 129 | Chr1: 330027-330155 | Arabidopsis thaliana |
AT1G01950:exon:26 | 377 | Chr1: 330243-330619 | Arabidopsis thaliana |
AT1G01960:exon:11 | 836 | Chr1: 330588-331423 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01950:five_prime_UTR:1 | 157 | Chr1: 325316-325472 | Arabidopsis thaliana |
AT1G01950:five_prime_UTR:2 | 313 | Chr1: 325329-325641 | Arabidopsis thaliana |
AT1G01950:five_prime_UTR:4 | 316 | Chr1: 325913-326228 | Arabidopsis thaliana |
AT1G01950:five_prime_UTR:5 | 30 | Chr1: 326332-326361 | Arabidopsis thaliana |
AT1G01950:five_prime_UTR:3 | 94 | Chr1: 325379-325472 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G01960 | locus:2025502 | EDA10 | embryo sac development arrest 10 | 7325 | Chr1: 330588-337912 | A. thaliana | SEC7-like guanine nucleotide exchange family protein;(source:Araport11) | Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. | SEC7-like guanine nucleotide exchange family protein | BIG3, EDA10 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G01950.1 | 3058 | Chr1: 325316-330619 |
AT1G01950.4 | 2921 | Chr1: 325329-330403 |
AT1G01950.3 | 3058 | Chr1: 325379-330619 |
AT1G01950.2 | 2944 | Chr1: 325379-330619 |
AT1G01960.1 | 5825 | Chr1: 330588-337912 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G01950:three_prime_UTR:1 | 216 | Chr1: 330404-330619 | Arabidopsis thaliana |
AT1G01960:three_prime_UTR:1 | 242 | Chr1: 330588-330829 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
KINUB_ARATH | function | Involved in the control of epidermal-cell morphogenesis in roots and helical growth of roots by promoting microtubule depolymerization and limiting the accumulation of endoplasmic microtubules. Seems to be involved in the control of cell-file rotation (or twisting). |
F4HU83_ARATH A0A1P8AMI8_ARATH F4HU85_ARATH KINUB_ARATH | similarity | Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. Ungrouped subfamily. |
KINUB_ARATH | tissue specificity | Expressed in the basal regions and petioles of immature leaves and in the root elongation zone. |
Function
Gene Ontology
cellular component | |
---|---|
kinesin complex | ECO |
microtubule | ECO |
cytoplasm | ECO |
molecular function | |
ATP binding | ECO |
ATP hydrolysis activity | ECO |
microtubule binding | ECO |
plus-end-directed microtubule motor activity | ECO |
biological process | |
cytoskeleton-dependent intracellular transport | ECO |
microtubule-based movement | ECO |
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...