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Gene : MIR164C A. thaliana

DB identifier  ? AT5G27807 Secondary Identifier  ? locus:1009023466
Name  ? microRNA164C
TAIR Computational Description  microRNA ath-MIR164c precursor;(source:Araport11)
TAIR Curator Summary  Encodes a microRNA that targets several genes containing NAC domains including NAC1. Overexpression leads to decreased NAC1 mRNA and reduced lateral roots. Loss of function mutants have increased NAC1 and increased number of lateral roots. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UGGAGAAGCAGGGCACGUGCG. Early extra petal mutant (eep1). Pri-mRNA coordinates for MIR164c (converted to TAIR10 based on PMID19304749): Chr5: 9852483-9853314 (forward), length: 832 bp; exon coordinates: exon 1: 9852483-9853314; mature miRNA and miRNA* are located on exon 1.
TAIR Short Description  MIR164/MIR164C; miRNA
TAIR Aliases  EEP1, MIR164, MIR164C

2 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 102  
Location: Chr5:9852674-9852775

Gene models - MIR164C AT5G27807

? Gene models

Overlapping Features

? Genome features that overlap coordinates of this Gene

1 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

No comments found

0 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
No terms in this category.
biological process
No terms in this category.

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets