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Gene : NAC105 A. thaliana

DB identifier  ? AT5G66300 Secondary Identifier  ? locus:2155046
Name  ? NAC domain containing protein 105 Brief Description  NAC domain containing protein 105
TAIR Computational Description  NAC domain containing protein 105;(source:Araport11)
TAIR Curator Summary  Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
TAIR Short Description  NAC domain containing protein 105
TAIR Aliases  ANAC105, NAC105, VND3

1 Gene Rifs

1 Organism

14 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1763  
Location: Chr5:26479766-26481528 reverse strand

Gene models - NAC105 AT5G66300

? Gene models

Transcripts: 1  Exons: 3  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

4 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
NC105_ARATH developmental stage Up-regulated during xylem vessel element formation. Expressed preferentially in procambial cells adjacent to root meristem.
NC105_ARATH function Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240).
NC105_ARATH similarity Belongs to the plant vascular related NAC-domain protein family.
NC105_ARATH tissue specificity Detected in root protoxylem and metaxylem poles and in vessels of protoxylems, outermost metaxylems, inner metaxylems, shoots and hypocotyls. Expressed in roots, hypocotyls, cotyledons and leaves (PubMed:18445131). Present in developing xylems (PubMed:16103214, PubMed:17565617). Present in root developing xylems (PubMed:16103214). Specifically expressed in vessels but not in interfascicular fibers in stems (PubMed:25148240).

1 Proteins

Function

Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets