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Gene : AT5G65500 A. thaliana

DB identifier  ? AT5G65500 Secondary Identifier  ? locus:2154656
Brief Description  U-box domain-containing protein kinase family protein
TAIR Computational Description  U-box domain-containing protein kinase family protein;(source:Araport11)
TAIR Curator Summary  Plant U-box type E3 ubiquitin ligase (PUB).
TAIR Short Description  U-box domain-containing protein kinase family protein
TAIR Aliases  PUB50

0 Gene Rifs

1 Organism

2 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3018  
Location: Chr5:26181093-26184110 reverse strand

Gene models - AT5G65500 AT5G65500

? Gene models

Transcripts: 2  Exons: 14  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

CDSs: 14, Exons: 11, Five Prime UTR: 1, mRNAs: 2

13 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PUB50_ARATH-2 A0A1P8BEU3_ARATH PUB50_ARATH function Functions as an E3 ubiquitin ligase.
PUB50_ARATH-2 A0A1P8BEU3_ARATH PUB50_ARATH pathway Protein modification; protein ubiquitination.
PUB50_ARATH-2 PUB50_ARATH similarity Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.

3 Proteins

Function

Gene Ontology

cellular component
No terms in this category.
molecular function
ATP binding  ? ECO  
protein kinase activity  ? ECO  
ubiquitin-protein transferase activity  ? ECO  
biological process
protein ubiquitination  ? ECO  
protein phosphorylation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets