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Gene : BT1 A. thaliana

DB identifier  ? AT5G63160 Secondary Identifier  ? locus:2161962
Name  ? BTB and TAZ domain protein 1 Brief Description  BTB and TAZ domain protein 1
TAIR Computational Description  BTB and TAZ domain protein 1;(source:Araport11)
TAIR Curator Summary  BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.
TAIR Short Description  BTB and TAZ domain protein 1
TAIR Aliases  BT1

2 Gene Rifs

1 Organism

17 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2399  
Location: Chr5:25333172-25335570 reverse strand

Gene models - BT1 AT5G63160

? Gene models

Transcripts: 3  Exons: 13  Introns: 10 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BT1_ARATH function May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Also targeted for degradation by the 26S proteasome pathway. May be involved in gametophyte development.
A0A1P8BEH5_ARATH A0A1P8BEI0_ARATH BT1_ARATH pathway Protein modification; protein ubiquitination.
BT1_ARATH tissue specificity Preferentially expressed in young leaves, roots and stems.

3 Proteins

Function

Gene Ontology

cellular component
nucleus  ? ECO  
cytoplasm  ? ECO  
molecular function
calmodulin binding  ? ECO  
metal ion binding  ? ECO  
biological process
pollen development  ? ECO  
protein ubiquitination  ? ECO  
regulation of DNA-templated transcription  ? ECO  
response to auxin  ? ECO  
response to salicylic acid  ? ECO  
embryo sac development  ? ECO  
response to hydrogen peroxide  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets