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Gene : cPT5 A. thaliana

DB identifier  ? AT5G58780 Secondary Identifier  ? locus:2178838
Name  ? cis -prenyltransferase 5 Brief Description  Undecaprenyl pyrophosphate synthetase family protein
TAIR Computational Description  Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11)
TAIR Curator Summary  Encodes a novel Z,E-mixed heptaprenyl diphosphate (Z,E-HepPP) synthase, which may be responsible for short-chain betulaprenols. It catalyzes the formation of C 35 short-chain polyisoprenoids in which the optimal allylic substrate was E,E-FPP. It may have a role in response to cold stress in root.
TAIR Short Description  Undecaprenyl pyrophosphate synthetase family protein
TAIR Aliases  AtcPT5, AtHEPS, cPT5, HEPS

1 Gene Rifs

1 Organism

10 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1716  
Location: Chr5:23735620-23737335 reverse strand

Gene models - cPT5 AT5G58780

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
DDPS3_ARATH function Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.
DDPS3_ARATH pathway Protein modification; protein glycosylation.
DDPS3_ARATH similarity Belongs to the UPP synthase family.

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum  ? ECO  
molecular function
rubber cis-polyprenylcistransferase activity  ? ECO  
polyprenyltransferase activity  ? ECO  
biological process
protein glycosylation  ? ECO  
response to cold  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets