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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58140:CDS:1 | 509 | Chr5: 23524771-23525279 | Arabidopsis thaliana |
AT5G58140:CDS:2 | 183 | Chr5: 23525403-23525585 | Arabidopsis thaliana |
AT5G58140:CDS:3 | 92 | Chr5: 23525667-23525758 | Arabidopsis thaliana |
AT5G58140:CDS:4 | 208 | Chr5: 23525885-23526092 | Arabidopsis thaliana |
AT5G58140:CDS:5 | 217 | Chr5: 23526495-23526711 | Arabidopsis thaliana |
AT5G58140:CDS:6 | 71 | Chr5: 23526874-23526944 | Arabidopsis thaliana |
AT5G58140:CDS:7 | 107 | Chr5: 23527074-23527180 | Arabidopsis thaliana |
AT5G58140:CDS:8 | 50 | Chr5: 23527267-23527316 | Arabidopsis thaliana |
AT5G58140:CDS:9 | 105 | Chr5: 23527407-23527511 | Arabidopsis thaliana |
AT5G58140:CDS:10 | 60 | Chr5: 23527592-23527651 | Arabidopsis thaliana |
AT5G58140:CDS:11 | 90 | Chr5: 23527727-23527816 | Arabidopsis thaliana |
AT5G58140:CDS:12 | 77 | Chr5: 23527892-23527968 | Arabidopsis thaliana |
AT5G58140:CDS:13 | 85 | Chr5: 23528066-23528150 | Arabidopsis thaliana |
AT5G58140:CDS:14 | 81 | Chr5: 23528247-23528327 | Arabidopsis thaliana |
AT5G58140:CDS:15 | 104 | Chr5: 23528407-23528510 | Arabidopsis thaliana |
AT5G58140:CDS:17 | 50 | Chr5: 23528726-23528775 | Arabidopsis thaliana |
AT5G58140:CDS:18 | 107 | Chr5: 23528912-23529018 | Arabidopsis thaliana |
AT5G58140:CDS:19 | 123 | Chr5: 23529096-23529218 | Arabidopsis thaliana |
AT5G58140:CDS:20 | 52 | Chr5: 23529317-23529368 | Arabidopsis thaliana |
AT5G58140:CDS:21 | 113 | Chr5: 23529453-23529565 | Arabidopsis thaliana |
AT5G58140:CDS:23 | 141 | Chr5: 23529646-23529786 | Arabidopsis thaliana |
AT5G58140:CDS:25 | 123 | Chr5: 23529871-23529993 | Arabidopsis thaliana |
AT5G58140:CDS:1.1 | 509 | Chr5: 23524771-23525279 | Arabidopsis thaliana |
AT5G58140:CDS:2.1 | 183 | Chr5: 23525403-23525585 | Arabidopsis thaliana |
AT5G58140:CDS:3.1 | 92 | Chr5: 23525667-23525758 | Arabidopsis thaliana |
AT5G58140:CDS:4.1 | 208 | Chr5: 23525885-23526092 | Arabidopsis thaliana |
AT5G58140:CDS:5.1 | 217 | Chr5: 23526495-23526711 | Arabidopsis thaliana |
AT5G58140:CDS:6.1 | 71 | Chr5: 23526874-23526944 | Arabidopsis thaliana |
AT5G58140:CDS:7.1 | 107 | Chr5: 23527074-23527180 | Arabidopsis thaliana |
AT5G58140:CDS:8.1 | 50 | Chr5: 23527267-23527316 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58140:exon:1 | 269 | Chr5: 23523825-23524093 | Arabidopsis thaliana |
AT5G58140:exon:6 | 335 | Chr5: 23524211-23524545 | Arabidopsis thaliana |
AT5G58140:exon:2 | 243 | Chr5: 23523851-23524093 | Arabidopsis thaliana |
AT5G58140:exon:3 | 416 | Chr5: 23524130-23524545 | Arabidopsis thaliana |
AT5G58140:exon:5 | 1150 | Chr5: 23524130-23525279 | Arabidopsis thaliana |
AT5G58140:exon:33 | 123 | Chr5: 23529871-23529993 | Arabidopsis thaliana |
AT5G58140:exon:4 | 420 | Chr5: 23524130-23524549 | Arabidopsis thaliana |
AT5G58140:exon:32 | 141 | Chr5: 23529646-23529786 | Arabidopsis thaliana |
AT5G58140:exon:7 | 63 | Chr5: 23524487-23524549 | Arabidopsis thaliana |
AT5G58140:exon:9 | 557 | Chr5: 23524723-23525279 | Arabidopsis thaliana |
AT5G58140:exon:24 | 369 | Chr5: 23528407-23528775 | Arabidopsis thaliana |
AT5G58140:exon:28 | 305 | Chr5: 23529096-23529400 | Arabidopsis thaliana |
AT5G58140:exon:8 | 758 | Chr5: 23524522-23525279 | Arabidopsis thaliana |
AT5G58140:exon:10 | 183 | Chr5: 23525403-23525585 | Arabidopsis thaliana |
AT5G58140:exon:11 | 92 | Chr5: 23525667-23525758 | Arabidopsis thaliana |
AT5G58140:exon:12 | 208 | Chr5: 23525885-23526092 | Arabidopsis thaliana |
AT5G58140:exon:13 | 217 | Chr5: 23526495-23526711 | Arabidopsis thaliana |
AT5G58140:exon:14 | 71 | Chr5: 23526874-23526944 | Arabidopsis thaliana |
AT5G58140:exon:15 | 107 | Chr5: 23527074-23527180 | Arabidopsis thaliana |
AT5G58140:exon:16 | 50 | Chr5: 23527267-23527316 | Arabidopsis thaliana |
AT5G58140:exon:17 | 105 | Chr5: 23527407-23527511 | Arabidopsis thaliana |
AT5G58140:exon:18 | 60 | Chr5: 23527592-23527651 | Arabidopsis thaliana |
AT5G58140:exon:19 | 90 | Chr5: 23527727-23527816 | Arabidopsis thaliana |
AT5G58140:exon:20 | 77 | Chr5: 23527892-23527968 | Arabidopsis thaliana |
AT5G58140:exon:21 | 85 | Chr5: 23528066-23528150 | Arabidopsis thaliana |
AT5G58140:exon:22 | 81 | Chr5: 23528247-23528327 | Arabidopsis thaliana |
AT5G58140:exon:23 | 104 | Chr5: 23528407-23528510 | Arabidopsis thaliana |
AT5G58140:exon:25 | 50 | Chr5: 23528726-23528775 | Arabidopsis thaliana |
AT5G58140:exon:26 | 107 | Chr5: 23528912-23529018 | Arabidopsis thaliana |
AT5G58140:exon:27 | 123 | Chr5: 23529096-23529218 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58140:five_prime_UTR:1 | 269 | Chr5: 23523825-23524093 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:6 | 335 | Chr5: 23524211-23524545 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:2 | 243 | Chr5: 23523851-23524093 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:3 | 416 | Chr5: 23524130-23524545 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:5 | 641 | Chr5: 23524130-23524770 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:4 | 420 | Chr5: 23524130-23524549 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:7 | 63 | Chr5: 23524487-23524549 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:9 | 48 | Chr5: 23524723-23524770 | Arabidopsis thaliana |
AT5G58140:five_prime_UTR:8 | 249 | Chr5: 23524522-23524770 | Arabidopsis thaliana |
AT5G58150:five_prime_UTR:1 | 267 | Chr5: 23532574-23532840 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G58150 | locus:2161303 | AT5G58150 | 2760 | Chr5: 23530081-23532840 | A. thaliana | Leucine-rich repeat protein kinase family protein;(source:Araport11) | NULL | Leucine-rich repeat protein kinase family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G58140.2 | 6518 | Chr5: 23523825-23533111 |
AT5G58140.5 | 3039 | Chr5: 23523851-23529993 |
AT5G58140.7 | 3212 | Chr5: 23524130-23529993 |
AT5G58140.6 | 3389 | Chr5: 23524130-23529993 |
AT5G58140.1 | 6334 | Chr5: 23524130-23533111 |
AT5G58140.4 | 2827 | Chr5: 23524487-23529400 |
AT5G58140.3 | 6110 | Chr5: 23524522-23533111 |
AT5G58150.1 | 2760 | Chr5: 23530081-23532840 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G58140:three_prime_UTR:5 | 3118 | Chr5: 23529994-23533111 | Arabidopsis thaliana |
AT5G58140:three_prime_UTR:1 | 234 | Chr5: 23528542-23528775 | Arabidopsis thaliana |
AT5G58140:three_prime_UTR:2 | 107 | Chr5: 23528912-23529018 | Arabidopsis thaliana |
AT5G58140:three_prime_UTR:3 | 305 | Chr5: 23529096-23529400 | Arabidopsis thaliana |
AT5G58140:three_prime_UTR:4 | 3164 | Chr5: 23529948-23533111 | Arabidopsis thaliana |
AT5G58150:three_prime_UTR:1 | 135 | Chr5: 23530081-23530215 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
PHOT2_ARATH-2 PHOT2_ARATH | function | Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for photo-induced movements (PubMed:14739272, PubMed:15821287, PubMed:31904040). Triggers the phosphorylation of AHA1 and AHA2 C-terminal penultimate Thr in guard cells to activate them and induce stomatal opening in response to blue light (BL) (PubMed:15821287, PubMed:31904040). Phosphorylates also BLUS1, a kinase involved in stomatal opening (PubMed:23811955). Mediates calcium spiking of extra- and intracellular origins in response to blue light. Involved in hypocotyl phototropism. Contributes to the chloroplast accumulation in low blue light and mediates their translocation (avoidance response) at high fluence. Regulates stomata opening and photomorphogenesis response of leaf tissue. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening. |
PHOT2_ARATH-2 A8MS49_ARATH PHOT2_ARATH | similarity | Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. |
PHOT2_ARATH-2 PHOT2_ARATH | tissue specificity | Expressed in leaves, stems and flowers, and to a lower extent in roots (PubMed:11251116). Present in guard cells (at protein level) (PubMed:15821287). |
Function
Gene Ontology
cellular component | |
---|---|
Golgi apparatus | ECO |
plasma membrane | ECO |
membrane | ECO |
plastid | ECO |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
protein serine kinase activity | ECO |
identical protein binding | ECO |
kinase activity | ECO |
protein serine/threonine kinase activity | ECO |
FMN binding | ECO |
blue light photoreceptor activity | ECO |
biological process | |
protein autophosphorylation | ECO |
stomatal movement | ECO |
chloroplast relocation | ECO |
response to blue light | ECO |
circadian rhythm | ECO |
phototropism | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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