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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53620:CDS:1 | 126 | Chr5: 21781217-21781342 | Arabidopsis thaliana |
AT5G53620:CDS:2 | 51 | Chr5: 21781579-21781629 | Arabidopsis thaliana |
AT5G53620:CDS:3 | 201 | Chr5: 21781722-21781922 | Arabidopsis thaliana |
AT5G53620:CDS:4 | 99 | Chr5: 21782024-21782122 | Arabidopsis thaliana |
AT5G53620:CDS:5 | 56 | Chr5: 21782205-21782260 | Arabidopsis thaliana |
AT5G53620:CDS:6 | 112 | Chr5: 21782481-21782592 | Arabidopsis thaliana |
AT5G53620:CDS:7 | 180 | Chr5: 21782732-21782911 | Arabidopsis thaliana |
AT5G53620:CDS:8 | 246 | Chr5: 21783004-21783249 | Arabidopsis thaliana |
AT5G53620:CDS:9 | 174 | Chr5: 21783651-21783824 | Arabidopsis thaliana |
AT5G53620:CDS:10 | 168 | Chr5: 21783900-21784067 | Arabidopsis thaliana |
AT5G53620:CDS:11 | 126 | Chr5: 21784144-21784269 | Arabidopsis thaliana |
AT5G53620:CDS:12 | 183 | Chr5: 21784380-21784562 | Arabidopsis thaliana |
AT5G53620:CDS:13 | 99 | Chr5: 21784657-21784755 | Arabidopsis thaliana |
AT5G53620:CDS:14 | 228 | Chr5: 21784834-21785061 | Arabidopsis thaliana |
AT5G53620:CDS:1.1 | 126 | Chr5: 21781217-21781342 | Arabidopsis thaliana |
AT5G53620:CDS:2.1 | 51 | Chr5: 21781579-21781629 | Arabidopsis thaliana |
AT5G53620:CDS:3.1 | 201 | Chr5: 21781722-21781922 | Arabidopsis thaliana |
AT5G53620:CDS:4.1 | 99 | Chr5: 21782024-21782122 | Arabidopsis thaliana |
AT5G53620:CDS:5.1 | 56 | Chr5: 21782205-21782260 | Arabidopsis thaliana |
AT5G53620:CDS:6.1 | 112 | Chr5: 21782481-21782592 | Arabidopsis thaliana |
AT5G53620:CDS:7.1 | 180 | Chr5: 21782732-21782911 | Arabidopsis thaliana |
AT5G53620:CDS:8.1 | 246 | Chr5: 21783004-21783249 | Arabidopsis thaliana |
AT5G53620:CDS:9.1 | 174 | Chr5: 21783651-21783824 | Arabidopsis thaliana |
AT5G53620:CDS:10.1 | 168 | Chr5: 21783900-21784067 | Arabidopsis thaliana |
AT5G53620:CDS:11.1 | 126 | Chr5: 21784144-21784269 | Arabidopsis thaliana |
AT5G53620:CDS:12.1 | 183 | Chr5: 21784380-21784562 | Arabidopsis thaliana |
AT5G53620:CDS:13.1 | 99 | Chr5: 21784657-21784755 | Arabidopsis thaliana |
AT5G53620:CDS:14.1 | 228 | Chr5: 21784834-21785061 | Arabidopsis thaliana |
AT5G53620:CDS:1.2 | 126 | Chr5: 21781217-21781342 | Arabidopsis thaliana |
AT5G53620:CDS:2.2 | 51 | Chr5: 21781579-21781629 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53620:exon:3 | 182 | Chr5: 21781161-21781342 | Arabidopsis thaliana |
AT5G53620:exon:2 | 396 | Chr5: 21780947-21781342 | Arabidopsis thaliana |
AT5G53620:exon:17 | 430 | Chr5: 21784834-21785263 | Arabidopsis thaliana |
AT5G53620:exon:1 | 129 | Chr5: 21780947-21781075 | Arabidopsis thaliana |
AT5G53620:exon:4 | 169 | Chr5: 21781174-21781342 | Arabidopsis thaliana |
AT5G53620:exon:5 | 51 | Chr5: 21781579-21781629 | Arabidopsis thaliana |
AT5G53620:exon:6 | 201 | Chr5: 21781722-21781922 | Arabidopsis thaliana |
AT5G53620:exon:7 | 99 | Chr5: 21782024-21782122 | Arabidopsis thaliana |
AT5G53620:exon:8 | 56 | Chr5: 21782205-21782260 | Arabidopsis thaliana |
AT5G53620:exon:9 | 112 | Chr5: 21782481-21782592 | Arabidopsis thaliana |
AT5G53620:exon:10 | 180 | Chr5: 21782732-21782911 | Arabidopsis thaliana |
AT5G53620:exon:11 | 246 | Chr5: 21783004-21783249 | Arabidopsis thaliana |
AT5G53620:exon:12 | 174 | Chr5: 21783651-21783824 | Arabidopsis thaliana |
AT5G53620:exon:13 | 168 | Chr5: 21783900-21784067 | Arabidopsis thaliana |
AT5G53620:exon:14 | 126 | Chr5: 21784144-21784269 | Arabidopsis thaliana |
AT5G53620:exon:15 | 183 | Chr5: 21784380-21784562 | Arabidopsis thaliana |
AT5G53620:exon:16 | 99 | Chr5: 21784657-21784755 | Arabidopsis thaliana |
AT5G53620:exon:18 | 454 | Chr5: 21784834-21785287 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53620:five_prime_UTR:3 | 56 | Chr5: 21781161-21781216 | Arabidopsis thaliana |
AT5G53620:five_prime_UTR:2 | 270 | Chr5: 21780947-21781216 | Arabidopsis thaliana |
AT5G53620:five_prime_UTR:1 | 129 | Chr5: 21780947-21781075 | Arabidopsis thaliana |
AT5G53620:five_prime_UTR:4 | 43 | Chr5: 21781174-21781216 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G53620.3 | 2436 | Chr5: 21780947-21785263 |
AT5G53620.2 | 2521 | Chr5: 21780947-21785263 |
AT5G53620.1 | 2447 | Chr5: 21780947-21785287 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G53620:three_prime_UTR:1 | 202 | Chr5: 21785062-21785263 | Arabidopsis thaliana |
AT5G53620:three_prime_UTR:2 | 226 | Chr5: 21785062-21785287 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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