External Links
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- ATTED-II
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52790:CDS:11 | 206 | Chr5: 21392306-21392511 | Arabidopsis thaliana |
AT5G52790:CDS:9 | 131 | Chr5: 21392605-21392735 | Arabidopsis thaliana |
AT5G52790:CDS:8 | 74 | Chr5: 21392822-21392895 | Arabidopsis thaliana |
AT5G52790:CDS:7 | 88 | Chr5: 21392979-21393066 | Arabidopsis thaliana |
AT5G52790:CDS:6 | 140 | Chr5: 21393154-21393293 | Arabidopsis thaliana |
AT5G52790:CDS:5 | 87 | Chr5: 21393397-21393483 | Arabidopsis thaliana |
AT5G52790:CDS:4 | 114 | Chr5: 21393580-21393693 | Arabidopsis thaliana |
AT5G52790:CDS:3 | 84 | Chr5: 21393779-21393862 | Arabidopsis thaliana |
AT5G52790:CDS:2 | 77 | Chr5: 21393979-21394055 | Arabidopsis thaliana |
AT5G52790:CDS:1 | 181 | Chr5: 21394147-21394327 | Arabidopsis thaliana |
AT5G52790:CDS:11.1 | 206 | Chr5: 21392306-21392511 | Arabidopsis thaliana |
AT5G52790:CDS:9.1 | 131 | Chr5: 21392605-21392735 | Arabidopsis thaliana |
AT5G52790:CDS:8.1 | 74 | Chr5: 21392822-21392895 | Arabidopsis thaliana |
AT5G52790:CDS:7.1 | 88 | Chr5: 21392979-21393066 | Arabidopsis thaliana |
AT5G52790:CDS:6.1 | 140 | Chr5: 21393154-21393293 | Arabidopsis thaliana |
AT5G52790:CDS:5.1 | 87 | Chr5: 21393397-21393483 | Arabidopsis thaliana |
AT5G52790:CDS:4.1 | 114 | Chr5: 21393580-21393693 | Arabidopsis thaliana |
AT5G52790:CDS:3.1 | 84 | Chr5: 21393779-21393862 | Arabidopsis thaliana |
AT5G52790:CDS:2.1 | 77 | Chr5: 21393979-21394055 | Arabidopsis thaliana |
AT5G52790:CDS:1.1 | 181 | Chr5: 21394147-21394327 | Arabidopsis thaliana |
AT5G52790:CDS:13 | 96 | Chr5: 21392167-21392262 | Arabidopsis thaliana |
AT5G52790:CDS:10 | 164 | Chr5: 21392348-21392511 | Arabidopsis thaliana |
AT5G52790:CDS:9.2 | 131 | Chr5: 21392605-21392735 | Arabidopsis thaliana |
AT5G52790:CDS:8.2 | 74 | Chr5: 21392822-21392895 | Arabidopsis thaliana |
AT5G52790:CDS:7.2 | 88 | Chr5: 21392979-21393066 | Arabidopsis thaliana |
AT5G52790:CDS:6.2 | 140 | Chr5: 21393154-21393293 | Arabidopsis thaliana |
AT5G52790:CDS:5.2 | 87 | Chr5: 21393397-21393483 | Arabidopsis thaliana |
AT5G52790:CDS:4.2 | 114 | Chr5: 21393580-21393693 | Arabidopsis thaliana |
AT5G52790:CDS:3.2 | 84 | Chr5: 21393779-21393862 | Arabidopsis thaliana |
AT5G52790:CDS:2.2 | 77 | Chr5: 21393979-21394055 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52790:exon:13 | 296 | Chr5: 21392216-21392511 | Arabidopsis thaliana |
AT5G52790:exon:20 | 222 | Chr5: 21391566-21391787 | Arabidopsis thaliana |
AT5G52790:exon:15 | 626 | Chr5: 21391886-21392511 | Arabidopsis thaliana |
AT5G52790:exon:2 | 560 | Chr5: 21394147-21394706 | Arabidopsis thaliana |
AT5G52790:exon:16 | 377 | Chr5: 21391886-21392262 | Arabidopsis thaliana |
AT5G52790:exon:19 | 206 | Chr5: 21391582-21391787 | Arabidopsis thaliana |
AT5G52790:exon:14 | 47 | Chr5: 21392216-21392262 | Arabidopsis thaliana |
AT5G52790:exon:1 | 870 | Chr5: 21394147-21395016 | Arabidopsis thaliana |
AT5G52790:exon:18 | 71 | Chr5: 21391717-21391787 | Arabidopsis thaliana |
AT5G52790:exon:17 | 268 | Chr5: 21391886-21392153 | Arabidopsis thaliana |
AT5G52790:exon:12 | 164 | Chr5: 21392348-21392511 | Arabidopsis thaliana |
AT5G52790:exon:11 | 131 | Chr5: 21392605-21392735 | Arabidopsis thaliana |
AT5G52790:exon:10 | 74 | Chr5: 21392822-21392895 | Arabidopsis thaliana |
AT5G52790:exon:9 | 88 | Chr5: 21392979-21393066 | Arabidopsis thaliana |
AT5G52790:exon:8 | 140 | Chr5: 21393154-21393293 | Arabidopsis thaliana |
AT5G52790:exon:7 | 87 | Chr5: 21393397-21393483 | Arabidopsis thaliana |
AT5G52790:exon:6 | 114 | Chr5: 21393580-21393693 | Arabidopsis thaliana |
AT5G52790:exon:5 | 84 | Chr5: 21393779-21393862 | Arabidopsis thaliana |
AT5G52790:exon:4 | 77 | Chr5: 21393979-21394055 | Arabidopsis thaliana |
AT5G52790:exon:3 | 325 | Chr5: 21394147-21394471 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52790:five_prime_UTR:2 | 379 | Chr5: 21394328-21394706 | Arabidopsis thaliana |
AT5G52790:five_prime_UTR:1 | 689 | Chr5: 21394328-21395016 | Arabidopsis thaliana |
AT5G52790:five_prime_UTR:3 | 144 | Chr5: 21394328-21394471 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G52790.3 | 2141 | Chr5: 21391566-21394706 |
AT5G52790.2 | 2203 | Chr5: 21391566-21394706 |
AT5G52790.4 | 2412 | Chr5: 21391582-21395016 |
AT5G52790.1 | 2350 | Chr5: 21391582-21395016 |
AT5G52790.5 | 1623 | Chr5: 21391717-21394471 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G52790:three_prime_UTR:4 | 268 | Chr5: 21391886-21392153 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:1 | 90 | Chr5: 21392216-21392305 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:9 | 222 | Chr5: 21391566-21391787 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:2 | 420 | Chr5: 21391886-21392305 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:7 | 206 | Chr5: 21391582-21391787 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:3 | 281 | Chr5: 21391886-21392166 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:8 | 158 | Chr5: 21391582-21391739 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:6 | 71 | Chr5: 21391717-21391787 | Arabidopsis thaliana |
AT5G52790:three_prime_UTR:5 | 34 | Chr5: 21391886-21391919 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
No terms in this category. | |
biological process | |
magnesium ion homeostasis | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...