External Links
- Aracyc
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42480:CDS:7 | 291 | Chr5: 16988042-16988332 | Arabidopsis thaliana |
AT5G42490:CDS:11 | 346 | Chr5: 16988609-16988954 | Arabidopsis thaliana |
AT5G42490:CDS:10 | 281 | Chr5: 16989046-16989326 | Arabidopsis thaliana |
AT5G42490:CDS:8 | 1932 | Chr5: 16989418-16991349 | Arabidopsis thaliana |
AT5G42490:CDS:7 | 63 | Chr5: 16991448-16991510 | Arabidopsis thaliana |
AT5G42490:CDS:6 | 68 | Chr5: 16991595-16991662 | Arabidopsis thaliana |
AT5G42490:CDS:5 | 82 | Chr5: 16991736-16991817 | Arabidopsis thaliana |
AT5G42490:CDS:4 | 114 | Chr5: 16991896-16992009 | Arabidopsis thaliana |
AT5G42490:CDS:3 | 101 | Chr5: 16992092-16992192 | Arabidopsis thaliana |
AT5G42490:CDS:2 | 90 | Chr5: 16992275-16992364 | Arabidopsis thaliana |
AT5G42490:CDS:1 | 175 | Chr5: 16992448-16992622 | Arabidopsis thaliana |
AT5G42490:CDS:11.1 | 346 | Chr5: 16988609-16988954 | Arabidopsis thaliana |
AT5G42490:CDS:10.1 | 281 | Chr5: 16989046-16989326 | Arabidopsis thaliana |
AT5G42490:CDS:9 | 1944 | Chr5: 16989406-16991349 | Arabidopsis thaliana |
AT5G42490:CDS:7.1 | 63 | Chr5: 16991448-16991510 | Arabidopsis thaliana |
AT5G42490:CDS:6.1 | 68 | Chr5: 16991595-16991662 | Arabidopsis thaliana |
AT5G42490:CDS:5.1 | 82 | Chr5: 16991736-16991817 | Arabidopsis thaliana |
AT5G42490:CDS:4.1 | 114 | Chr5: 16991896-16992009 | Arabidopsis thaliana |
AT5G42490:CDS:3.1 | 101 | Chr5: 16992092-16992192 | Arabidopsis thaliana |
AT5G42490:CDS:2.1 | 90 | Chr5: 16992275-16992364 | Arabidopsis thaliana |
AT5G42490:CDS:1.1 | 175 | Chr5: 16992448-16992622 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42480:exon:8 | 755 | Chr5: 16988042-16988796 | Arabidopsis thaliana |
AT5G42480:exon:7 | 736 | Chr5: 16987817-16988552 | Arabidopsis thaliana |
AT5G42490:exon:13 | 675 | Chr5: 16988280-16988954 | Arabidopsis thaliana |
AT5G42490:exon:9 | 1932 | Chr5: 16989418-16991349 | Arabidopsis thaliana |
AT5G42490:exon:1 | 307 | Chr5: 16992448-16992754 | Arabidopsis thaliana |
AT5G42490:exon:12 | 346 | Chr5: 16988609-16988954 | Arabidopsis thaliana |
AT5G42490:exon:11 | 281 | Chr5: 16989046-16989326 | Arabidopsis thaliana |
AT5G42490:exon:10 | 1944 | Chr5: 16989406-16991349 | Arabidopsis thaliana |
AT5G42490:exon:8 | 63 | Chr5: 16991448-16991510 | Arabidopsis thaliana |
AT5G42490:exon:7 | 68 | Chr5: 16991595-16991662 | Arabidopsis thaliana |
AT5G42490:exon:6 | 82 | Chr5: 16991736-16991817 | Arabidopsis thaliana |
AT5G42490:exon:5 | 114 | Chr5: 16991896-16992009 | Arabidopsis thaliana |
AT5G42490:exon:4 | 101 | Chr5: 16992092-16992192 | Arabidopsis thaliana |
AT5G42490:exon:3 | 90 | Chr5: 16992275-16992364 | Arabidopsis thaliana |
AT5G42490:exon:2 | 293 | Chr5: 16992448-16992740 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42490:five_prime_UTR:1 | 132 | Chr5: 16992623-16992754 | Arabidopsis thaliana |
AT5G42490:five_prime_UTR:2 | 118 | Chr5: 16992623-16992740 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT5G42480 | locus:2162341 | ARC6 | ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 | 3701 | Chr5: 16985096-16988796 | A. thaliana | Chaperone DnaJ-domain superfamily protein;(source:Araport11) | Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast. | Chaperone DnaJ-domain superfamily protein | ARC6 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G42480.1 | 3069 | Chr5: 16985096-16988796 |
AT5G42480.2 | 2855 | Chr5: 16985157-16988552 |
AT5G42490.2 | 3713 | Chr5: 16988280-16992754 |
AT5G42490.1 | 3382 | Chr5: 16988609-16992740 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G42480:three_prime_UTR:2 | 464 | Chr5: 16988333-16988796 | Arabidopsis thaliana |
AT5G42480:three_prime_UTR:1 | 590 | Chr5: 16987963-16988552 | Arabidopsis thaliana |
AT5G42490:three_prime_UTR:1 | 329 | Chr5: 16988280-16988608 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8BH14_ARATH | similarity | Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. KIN-7 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
ATP binding | ECO |
microtubule binding | ECO |
microtubule motor activity | ECO |
biological process | |
microtubule-based movement | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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