help  | faq  | software  | BAR
Hide

Oops!

Error: 403
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect

Gene : AT5G38940 A. thaliana

DB identifier  ? AT5G38940 Secondary Identifier  ? locus:2152267
Brief Description  RmlC-like cupins superfamily protein
TAIR Computational Description  RmlC-like cupins superfamily protein;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  RmlC-like cupins superfamily protein

0 Gene Rifs

1 Organism

7 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1169  
Location: Chr5:15588623-15589791

Gene models - AT5G38940 AT5G38940

? Gene models

Transcripts: 2  Exons: 4  Introns: 2 

Overlapping Features

? Genome features that overlap coordinates of this Gene

6 Child Features

0 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
GL111_ARATH A0A1P8BC77_ARATH function May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.
GL111_ARATH A0A1P8BC77_ARATH similarity Belongs to the germin family.

2 Proteins

Function

Gene Ontology

cellular component
apoplast  ? ECO  
molecular function
manganese ion binding  ? ECO  
biological process
No terms in this category.

Interactions

Interaction Network

Error loading results. Please clear your cache and try again.
Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

5 Data Sets