External Links
- Aracyc
- AceView
- Plant Proteome Database
- SUBA
- Gramene
- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
- AtcisDB
- Plaza
- pep2pro
- NCBI-Entrez
- PIR
- AtGDB
- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G15070:CDS:1 | 69 | Chr5: 4876898-4876966 | Arabidopsis thaliana |
AT5G15070:CDS:3 | 60 | Chr5: 4877139-4877198 | Arabidopsis thaliana |
AT5G15070:CDS:4 | 47 | Chr5: 4877466-4877512 | Arabidopsis thaliana |
AT5G15070:CDS:5 | 84 | Chr5: 4877696-4877779 | Arabidopsis thaliana |
AT5G15070:CDS:6 | 64 | Chr5: 4877862-4877925 | Arabidopsis thaliana |
AT5G15070:CDS:7 | 154 | Chr5: 4878100-4878253 | Arabidopsis thaliana |
AT5G15070:CDS:8 | 71 | Chr5: 4878621-4878691 | Arabidopsis thaliana |
AT5G15070:CDS:9 | 105 | Chr5: 4878919-4879023 | Arabidopsis thaliana |
AT5G15070:CDS:10 | 93 | Chr5: 4879319-4879411 | Arabidopsis thaliana |
AT5G15070:CDS:12 | 75 | Chr5: 4879594-4879668 | Arabidopsis thaliana |
AT5G15070:CDS:13 | 86 | Chr5: 4880035-4880120 | Arabidopsis thaliana |
AT5G15070:CDS:14 | 207 | Chr5: 4880465-4880671 | Arabidopsis thaliana |
AT5G15070:CDS:15 | 100 | Chr5: 4880758-4880857 | Arabidopsis thaliana |
AT5G15070:CDS:16 | 71 | Chr5: 4880946-4881016 | Arabidopsis thaliana |
AT5G15070:CDS:17 | 79 | Chr5: 4881385-4881463 | Arabidopsis thaliana |
AT5G15070:CDS:18 | 159 | Chr5: 4881621-4881779 | Arabidopsis thaliana |
AT5G15070:CDS:19 | 43 | Chr5: 4881936-4881978 | Arabidopsis thaliana |
AT5G15070:CDS:20 | 83 | Chr5: 4882133-4882215 | Arabidopsis thaliana |
AT5G15070:CDS:21 | 63 | Chr5: 4882330-4882392 | Arabidopsis thaliana |
AT5G15070:CDS:22 | 75 | Chr5: 4882471-4882545 | Arabidopsis thaliana |
AT5G15070:CDS:23 | 126 | Chr5: 4882896-4883021 | Arabidopsis thaliana |
AT5G15070:CDS:24 | 242 | Chr5: 4883290-4883531 | Arabidopsis thaliana |
AT5G15070:CDS:25 | 45 | Chr5: 4883609-4883653 | Arabidopsis thaliana |
AT5G15070:CDS:26 | 67 | Chr5: 4883764-4883830 | Arabidopsis thaliana |
AT5G15070:CDS:27 | 72 | Chr5: 4884049-4884120 | Arabidopsis thaliana |
AT5G15070:CDS:28 | 245 | Chr5: 4884264-4884508 | Arabidopsis thaliana |
AT5G15070:CDS:29 | 58 | Chr5: 4884599-4884656 | Arabidopsis thaliana |
AT5G15070:CDS:30 | 168 | Chr5: 4884900-4885067 | Arabidopsis thaliana |
AT5G15070:CDS:33 | 75 | Chr5: 4885175-4885249 | Arabidopsis thaliana |
AT5G15070:CDS:34 | 264 | Chr5: 4885352-4885615 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G15070:exon:2 | 452 | Chr5: 4876515-4876966 | Arabidopsis thaliana |
AT5G15070:exon:35 | 350 | Chr5: 4884900-4885249 | Arabidopsis thaliana |
AT5G15070:exon:1 | 120 | Chr5: 4876515-4876634 | Arabidopsis thaliana |
AT5G15070:exon:5 | 157 | Chr5: 4876828-4876984 | Arabidopsis thaliana |
AT5G15070:exon:40 | 485 | Chr5: 4885352-4885836 | Arabidopsis thaliana |
AT5G15070:exon:3 | 47 | Chr5: 4876588-4876634 | Arabidopsis thaliana |
AT5G15070:exon:4 | 139 | Chr5: 4876828-4876966 | Arabidopsis thaliana |
AT5G15070:exon:6 | 60 | Chr5: 4877139-4877198 | Arabidopsis thaliana |
AT5G15070:exon:7 | 47 | Chr5: 4877466-4877512 | Arabidopsis thaliana |
AT5G15070:exon:8 | 84 | Chr5: 4877696-4877779 | Arabidopsis thaliana |
AT5G15070:exon:9 | 64 | Chr5: 4877862-4877925 | Arabidopsis thaliana |
AT5G15070:exon:10 | 154 | Chr5: 4878100-4878253 | Arabidopsis thaliana |
AT5G15070:exon:11 | 71 | Chr5: 4878621-4878691 | Arabidopsis thaliana |
AT5G15070:exon:12 | 105 | Chr5: 4878919-4879023 | Arabidopsis thaliana |
AT5G15070:exon:36 | 105 | Chr5: 4885145-4885249 | Arabidopsis thaliana |
AT5G15070:exon:38 | 351 | Chr5: 4885352-4885702 | Arabidopsis thaliana |
AT5G15070:exon:13 | 107 | Chr5: 4879115-4879221 | Arabidopsis thaliana |
AT5G15070:exon:15 | 93 | Chr5: 4879319-4879411 | Arabidopsis thaliana |
AT5G15070:exon:14 | 280 | Chr5: 4879132-4879411 | Arabidopsis thaliana |
AT5G15070:exon:16 | 75 | Chr5: 4879594-4879668 | Arabidopsis thaliana |
AT5G15070:exon:17 | 86 | Chr5: 4880035-4880120 | Arabidopsis thaliana |
AT5G15070:exon:18 | 207 | Chr5: 4880465-4880671 | Arabidopsis thaliana |
AT5G15070:exon:19 | 100 | Chr5: 4880758-4880857 | Arabidopsis thaliana |
AT5G15070:exon:20 | 71 | Chr5: 4880946-4881016 | Arabidopsis thaliana |
AT5G15070:exon:21 | 79 | Chr5: 4881385-4881463 | Arabidopsis thaliana |
AT5G15070:exon:22 | 159 | Chr5: 4881621-4881779 | Arabidopsis thaliana |
AT5G15070:exon:23 | 43 | Chr5: 4881936-4881978 | Arabidopsis thaliana |
AT5G15070:exon:24 | 83 | Chr5: 4882133-4882215 | Arabidopsis thaliana |
AT5G15070:exon:25 | 63 | Chr5: 4882330-4882392 | Arabidopsis thaliana |
AT5G15070:exon:26 | 75 | Chr5: 4882471-4882545 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G15070:five_prime_UTR:2 | 383 | Chr5: 4876515-4876897 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:1 | 120 | Chr5: 4876515-4876634 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:3 | 47 | Chr5: 4876588-4876634 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:4 | 70 | Chr5: 4876828-4876897 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:5 | 107 | Chr5: 4879115-4879221 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:7 | 69 | Chr5: 4879319-4879387 | Arabidopsis thaliana |
AT5G15070:five_prime_UTR:6 | 256 | Chr5: 4879132-4879387 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT5G15070.4 | 3739 | Chr5: 4876515-4885821 |
AT5G15070.3 | 3846 | Chr5: 4876515-4885821 |
AT5G15070.1 | 3561 | Chr5: 4876515-4885836 |
AT5G15070.5 | 3579 | Chr5: 4876515-4885836 |
AT5G15070.2 | 3384 | Chr5: 4876588-4885702 |
AT5G15070.6 | 2809 | Chr5: 4879115-4885821 |
AT5G15070.7 | 2889 | Chr5: 4879132-4885821 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT5G15070:three_prime_UTR:1 | 173 | Chr5: 4885077-4885249 | Arabidopsis thaliana |
AT5G15070:three_prime_UTR:2 | 470 | Chr5: 4885352-4885821 | Arabidopsis thaliana |
AT5G15070:three_prime_UTR:5 | 221 | Chr5: 4885616-4885836 | Arabidopsis thaliana |
AT5G15070:three_prime_UTR:3 | 87 | Chr5: 4885616-4885702 | Arabidopsis thaliana |
AT5G15070:three_prime_UTR:4 | 206 | Chr5: 4885616-4885821 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
A0A1P8BBK5_ARATH A0A1P8BBN0_ARATH A0A1P8BBL1_ARATH | function | Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6). |
VIP2L_ARATH VIP2L_ARATH-2 | function | Bifunctional inositol kinase that acts in concert with the IP6K kinases to synthesize the diphosphate group-containing inositol pyrophosphates diphosphoinositol pentakisphosphate, PP-InsP5, and bis-diphosphoinositol tetrakisphosphate, (PP)2-InsP4. PP-InsP5 and (PP)2-InsP4, also respectively called InsP7 and InsP8, may regulate a variety of cellular processes, including apoptosis, vesicle trafficking, cytoskeletal dynamics, and exocytosis. Phosphorylates inositol hexakisphosphate (InsP6) at position 1 to produce PP-InsP5 which is in turn phosphorylated by IP6Ks to produce (PP)2-InsP4. Alternatively, phosphorylates PP-InsP5 at position 1, produced by IP6Ks from InsP6, to produce (PP)2-InsP4 (PubMed:25231822). Probably involved in vitamin E homeostasis via the regulation of gamma-tocopherol biosynthesis (By similarity). |
A0A1P8BBK5_ARATH VIP2L_ARATH VIP2L_ARATH-2 A0A1P8BBN0_ARATH A0A1P8BBL1_ARATH | similarity | Belongs to the histidine acid phosphatase family. VIP1 subfamily. |
VIP2L_ARATH VIP2L_ARATH-2 | tissue specificity | Mostly expressed at low levels in roots and reproductive tissues (e.g. flowers and siliques), and, to a lower extent, in vegetative tissues (e.g. roots, shoots, leaves and stems) (PubMed:25231822). Also present in mature pollen (PubMed:25231822, PubMed:25901085). |
Function
Gene Ontology
cellular component | |
---|---|
cytosol | ECO |
plasma membrane | ECO |
plastid | ECO |
molecular function | |
ATP binding | ECO |
inositol hexakisphosphate kinase activity | ECO |
5-diphosphoinositol pentakisphosphate 1-kinase activity | ECO |
inositol hexakisphosphate 1-kinase activity | ECO |
inositol hexakisphosphate 5-kinase activity | ECO |
diphosphoinositol pentakisphosphate kinase activity | ECO |
biological process | |
positive regulation of vitamin E biosynthetic process | ECO |
inositol phosphate biosynthetic process | ECO |
phosphorylation | ECO |
inositol metabolic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
Reset view
Show in table format
Export graph
- Click on a gene to get more info about it.
Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
---|
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...