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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G28760:CDS:1 | 139 | Chr4: 14208640-14208778 | Arabidopsis thaliana |
AT4G28760:CDS:2 | 80 | Chr4: 14208902-14208981 | Arabidopsis thaliana |
AT4G28760:CDS:3 | 1737 | Chr4: 14209078-14210814 | Arabidopsis thaliana |
AT4G28760:CDS:4 | 154 | Chr4: 14210905-14211058 | Arabidopsis thaliana |
AT4G28760:CDS:5 | 665 | Chr4: 14211147-14211811 | Arabidopsis thaliana |
AT4G28760:CDS:1.1 | 139 | Chr4: 14208640-14208778 | Arabidopsis thaliana |
AT4G28760:CDS:2.1 | 80 | Chr4: 14208902-14208981 | Arabidopsis thaliana |
AT4G28760:CDS:3.1 | 1737 | Chr4: 14209078-14210814 | Arabidopsis thaliana |
AT4G28760:CDS:4.1 | 154 | Chr4: 14210905-14211058 | Arabidopsis thaliana |
AT4G28760:CDS:5.1 | 665 | Chr4: 14211147-14211811 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G28760:exon:1 | 301 | Chr4: 14207460-14207760 | Arabidopsis thaliana |
AT4G28760:exon:3 | 74 | Chr4: 14208170-14208243 | Arabidopsis thaliana |
AT4G28760:exon:2 | 296 | Chr4: 14207465-14207760 | Arabidopsis thaliana |
AT4G28760:exon:4 | 147 | Chr4: 14208632-14208778 | Arabidopsis thaliana |
AT4G28760:exon:5 | 80 | Chr4: 14208902-14208981 | Arabidopsis thaliana |
AT4G28760:exon:6 | 1737 | Chr4: 14209078-14210814 | Arabidopsis thaliana |
AT4G28760:exon:7 | 154 | Chr4: 14210905-14211058 | Arabidopsis thaliana |
AT4G28760:exon:8 | 904 | Chr4: 14211147-14212050 | Arabidopsis thaliana |
AT4G28770:exon:9 | 364 | Chr4: 14211855-14212218 | Arabidopsis thaliana |
AT4G28770:exon:8 | 295 | Chr4: 14211924-14212218 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G28760:five_prime_UTR:1 | 301 | Chr4: 14207460-14207760 | Arabidopsis thaliana |
AT4G28760:five_prime_UTR:3 | 74 | Chr4: 14208170-14208243 | Arabidopsis thaliana |
AT4G28760:five_prime_UTR:2 | 296 | Chr4: 14207465-14207760 | Arabidopsis thaliana |
AT4G28760:five_prime_UTR:4 | 8 | Chr4: 14208632-14208639 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT4G28770 | locus:2117833 | AT4G28770 | 2115 | Chr4: 14211855-14213969 | A. thaliana | Tetraspanin family protein;(source:Araport11) | NULL | Tetraspanin family protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT4G28760.2 | 3397 | Chr4: 14207460-14212050 |
AT4G28760.1 | 3318 | Chr4: 14207465-14212050 |
AT4G28770.2 | 1373 | Chr4: 14211855-14213969 |
AT4G28770.1 | 1252 | Chr4: 14211924-14213671 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT4G28760:three_prime_UTR:1 | 239 | Chr4: 14211812-14212050 | Arabidopsis thaliana |
AT4G28770:three_prime_UTR:2 | 322 | Chr4: 14211855-14212176 | Arabidopsis thaliana |
AT4G28770:three_prime_UTR:1 | 253 | Chr4: 14211924-14212176 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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