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Gene : MIR168A A. thaliana

DB identifier  ? AT4G19395 Secondary Identifier  ? locus:1009023317
Name  ? microRNA168A
TAIR Computational Description  microRNA ath-MIR168a precursor;(source:Araport11)
TAIR Curator Summary  Encodes a microRNA that targets AGO1. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UCGCUUGGUGCAGGUCGGGAA. MIR168a is highly expressed and predominantly produces a 21-nt miR168 species. By contrast, MIR168b is expressed at low levels and produces an equal amount of 21- and 22-nt miR168 species. Only the 21-nt miR168 is preferentially stabilized by AGO1, and consequently, the accumulation of the 22-nt but not the 21-nt miR168 is reduced when DCL1 activity is impaired. mir168a mutants with strongly reduced levels of 21-nt miR168 are viable but exhibit developmental defects, particularly during environmentally challenging conditions.
TAIR Short Description  MIR168/MIR168A; miRNA
TAIR Aliases  MIR168, MIR168A

1 Gene Rifs

1 Organism

17 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 138  
Location: Chr4:10578635-10578772

Gene models - MIR168A AT4G19395

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Overlapping Features

? Genome features that overlap coordinates of this Gene

1 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

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0 Proteins

Function

Gene Ontology

cellular component
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molecular function
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biological process
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Interactions

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets