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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61160:CDS:1 | 63 | Chr3: 22636209-22636271 | Arabidopsis thaliana |
AT3G61160:CDS:2 | 138 | Chr3: 22636378-22636515 | Arabidopsis thaliana |
AT3G61160:CDS:4 | 93 | Chr3: 22636629-22636721 | Arabidopsis thaliana |
AT3G61160:CDS:5 | 60 | Chr3: 22636822-22636881 | Arabidopsis thaliana |
AT3G61160:CDS:6 | 273 | Chr3: 22636964-22637236 | Arabidopsis thaliana |
AT3G61160:CDS:7 | 75 | Chr3: 22637321-22637395 | Arabidopsis thaliana |
AT3G61160:CDS:8 | 57 | Chr3: 22637481-22637537 | Arabidopsis thaliana |
AT3G61160:CDS:9 | 141 | Chr3: 22637623-22637763 | Arabidopsis thaliana |
AT3G61160:CDS:10 | 51 | Chr3: 22637855-22637905 | Arabidopsis thaliana |
AT3G61160:CDS:12 | 108 | Chr3: 22637989-22638096 | Arabidopsis thaliana |
AT3G61160:CDS:1.1 | 63 | Chr3: 22636209-22636271 | Arabidopsis thaliana |
AT3G61160:CDS:3 | 159 | Chr3: 22636378-22636536 | Arabidopsis thaliana |
AT3G61160:CDS:4.1 | 93 | Chr3: 22636629-22636721 | Arabidopsis thaliana |
AT3G61160:CDS:5.1 | 60 | Chr3: 22636822-22636881 | Arabidopsis thaliana |
AT3G61160:CDS:6.1 | 273 | Chr3: 22636964-22637236 | Arabidopsis thaliana |
AT3G61160:CDS:7.1 | 75 | Chr3: 22637321-22637395 | Arabidopsis thaliana |
AT3G61160:CDS:8.1 | 57 | Chr3: 22637481-22637537 | Arabidopsis thaliana |
AT3G61160:CDS:9.1 | 141 | Chr3: 22637623-22637763 | Arabidopsis thaliana |
AT3G61160:CDS:10.1 | 51 | Chr3: 22637855-22637905 | Arabidopsis thaliana |
AT3G61160:CDS:12.1 | 108 | Chr3: 22637989-22638096 | Arabidopsis thaliana |
AT3G61160:CDS:1.2 | 63 | Chr3: 22636209-22636271 | Arabidopsis thaliana |
AT3G61160:CDS:2.1 | 138 | Chr3: 22636378-22636515 | Arabidopsis thaliana |
AT3G61160:CDS:4.2 | 93 | Chr3: 22636629-22636721 | Arabidopsis thaliana |
AT3G61160:CDS:5.2 | 60 | Chr3: 22636822-22636881 | Arabidopsis thaliana |
AT3G61160:CDS:6.2 | 273 | Chr3: 22636964-22637236 | Arabidopsis thaliana |
AT3G61160:CDS:7.2 | 75 | Chr3: 22637321-22637395 | Arabidopsis thaliana |
AT3G61160:CDS:8.2 | 57 | Chr3: 22637481-22637537 | Arabidopsis thaliana |
AT3G61160:CDS:9.2 | 141 | Chr3: 22637623-22637763 | Arabidopsis thaliana |
AT3G61160:CDS:10.2 | 51 | Chr3: 22637855-22637905 | Arabidopsis thaliana |
AT3G61160:CDS:11 | 96 | Chr3: 22637989-22638084 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61160:exon:1 | 469 | Chr3: 22635803-22636271 | Arabidopsis thaliana |
AT3G61160:exon:13 | 108 | Chr3: 22637989-22638096 | Arabidopsis thaliana |
AT3G61160:exon:15 | 108 | Chr3: 22638192-22638299 | Arabidopsis thaliana |
AT3G61160:exon:17 | 135 | Chr3: 22638354-22638488 | Arabidopsis thaliana |
AT3G61160:exon:4 | 159 | Chr3: 22636378-22636536 | Arabidopsis thaliana |
AT3G61160:exon:2 | 456 | Chr3: 22635816-22636271 | Arabidopsis thaliana |
AT3G61160:exon:3 | 138 | Chr3: 22636378-22636515 | Arabidopsis thaliana |
AT3G61160:exon:5 | 93 | Chr3: 22636629-22636721 | Arabidopsis thaliana |
AT3G61160:exon:6 | 60 | Chr3: 22636822-22636881 | Arabidopsis thaliana |
AT3G61160:exon:7 | 273 | Chr3: 22636964-22637236 | Arabidopsis thaliana |
AT3G61160:exon:8 | 75 | Chr3: 22637321-22637395 | Arabidopsis thaliana |
AT3G61160:exon:9 | 57 | Chr3: 22637481-22637537 | Arabidopsis thaliana |
AT3G61160:exon:10 | 141 | Chr3: 22637623-22637763 | Arabidopsis thaliana |
AT3G61160:exon:11 | 51 | Chr3: 22637855-22637905 | Arabidopsis thaliana |
AT3G61160:exon:12 | 96 | Chr3: 22637989-22638084 | Arabidopsis thaliana |
AT3G61160:exon:14 | 84 | Chr3: 22638192-22638275 | Arabidopsis thaliana |
AT3G61160:exon:16 | 103 | Chr3: 22638354-22638456 | Arabidopsis thaliana |
AT3G61160:exon:18 | 286 | Chr3: 22638532-22638817 | Arabidopsis thaliana |
AT3G61170:exon:3 | 148 | Chr3: 22638691-22638838 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61160:five_prime_UTR:1 | 406 | Chr3: 22635803-22636208 | Arabidopsis thaliana |
AT3G61160:five_prime_UTR:2 | 393 | Chr3: 22635816-22636208 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G61170 | locus:2098901 | AT3G61170 | 2669 | Chr3: 22638691-22641359 | A. thaliana | Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) | NULL | Tetratricopeptide repeat (TPR)-like superfamily protein |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G61160.3 | 1465 | Chr3: 22635803-22638096 |
AT3G61160.6 | 1473 | Chr3: 22635816-22638096 |
AT3G61160.5 | 1548 | Chr3: 22635816-22638299 |
AT3G61160.4 | 1659 | Chr3: 22635816-22638488 |
AT3G61160.2 | 1934 | Chr3: 22635816-22638817 |
AT3G61160.1 | 1913 | Chr3: 22635816-22638817 |
AT3G61170.1 | 2474 | Chr3: 22638691-22641359 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G61160:three_prime_UTR:1 | 224 | Chr3: 22638594-22638817 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
KSG2_ARATH | function | May mediate extracellular signals to regulate transcription in differentiating cells. |
KSG2_ARATH A0A1I9LQI7_ARATH A0A1I9LQI6_ARATH A0A1I9LQI5_ARATH A0A1I9LQI4_ARATH A0A384KL29_ARATH | similarity | Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. GSK-3 subfamily. |
Function
Gene Ontology
cellular component | |
---|---|
nucleus | ECO |
cytoplasm | ECO |
molecular function | |
ATP binding | ECO |
histone H2AS1 kinase activity | ECO |
protein serine kinase activity | ECO |
protein serine/threonine kinase activity | ECO |
biological process | |
cell differentiation | ECO |
protein phosphorylation | ECO |
signal transduction | ECO |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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